Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog XAC0737 - Xanthomonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Stenotrophomonas maltophilia K279a
Xanthomonas axonopodis pv. citri str. 306 2 1
Xanthomonas campestris pv. campestris str. ATCC 33913 2 1
Xylella fastidiosa 9a5c
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
phzF
 
Stenotrophomonas maltophilia K279a
*
Xanthomonas axonopodis pv. citri str. 306

Site:
position = -114
score = 10.3082
sequence = ATCTGTACTGG-(20)-ATCTGTACTGG

Gene: XAC0738: Phenazine biosynthesis protein PhzF like
*
Xanthomonas campestris pv. campestris str. ATCC 33913

Site:
position = -107
score = 9.38213
sequence = ATCTGTATTGG-(20)-ATCTGTCCTGG

Gene: XCC3385: Phenazine biosynthesis protein PhzF like
 
Xylella fastidiosa 9a5c
Phenazine biosynthesis protein PhzF like
PF00892
 
Stenotrophomonas maltophilia K279a
 
Xanthomonas axonopodis pv. citri str. 306

Gene: XAC0739: Permeases of the drug/metabolite transporter (DMT) superfamily
 
Xanthomonas campestris pv. campestris str. ATCC 33913

Gene: XCC3384: Permeases of the drug/metabolite transporter (DMT) superfamily
 
Xylella fastidiosa 9a5c
Permeases of the drug/metabolite transporter (DMT) superfamily
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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