Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Daro_1932 - Various betaproteobacteria

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Methylobacillus flagellatus KT
Methylophilales bacterium HTCC2181
Methylotenera mobilis JLW8
Nitrosomonas europaea ATCC 19718
Nitrosospira multiformis ATCC 25196
Thiobacillus denitrificans
Chromobacterium violaceum ATCC 12472
Laribacter hongkongensis HLHK9 1 1
Neisseria meningitidis MC58
Azoarcus sp. EbN1
Dechloromonas aromatica RCB 1 1
Thauera sp. MZ1T
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Daro_1931
 
Methylobacillus flagellatus KT
 
Methylophilales bacterium HTCC2181
 
Methylotenera mobilis JLW8
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472
 
Laribacter hongkongensis HLHK9
 
Neisseria meningitidis MC58
 
Azoarcus sp. EbN1
*
Dechloromonas aromatica RCB

Site:
position = -118
score = 18.8988
sequence = ACCAGTACAGATGA-(11)-ACCGGCACAGTTTT-(8)-AATACTGTACCGAT-(11)-TTCATTGTGACTGT

Gene: Daro_1931: hypothetical protein
 
Thauera sp. MZ1T
hypothetical protein
 
CRON 2.
LHK_00950
 
Methylobacillus flagellatus KT
 
Methylophilales bacterium HTCC2181
 
Methylotenera mobilis JLW8
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472
*
Laribacter hongkongensis HLHK9

Site:
position = -142
score = 19.1549
sequence = ACAGTGACAGATTG-(11)-AGGGTGACAGTTGC-(9)-GCAACTGTACTGCT-(11)-CCGGGTGTGGCTGT

Gene: LHK_00950: hypothetical protein
 
Neisseria meningitidis MC58
 
Azoarcus sp. EbN1
 
Dechloromonas aromatica RCB
 
Thauera sp. MZ1T
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD