Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Gbem_0803 - Desulfuromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Geobacter sp. M21 1 1
Geobacter sp. FRC-32 1 1
Geobacter lovleyi SZ
Desulfuromonas acetoxidans DSM 684
Pelobacter propionicus DSM 2379
Pelobacter carbinolicus str. DSM 2380 4 2
Geobacter metallireducens GS-15
Geobacter sulfurreducens PCA 1 1
Geobacter uraniumreducens Rf4 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Pcar_0522
 
Geobacter sp. M21
 
Geobacter sp. FRC-32
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379
*2
Pelobacter carbinolicus str. DSM 2380

Gene: Pcar_0522: MoxR-like ATPases

Site:
position = -148
score = 11.63
sequence = AACAGTTG-(17)-AACAGATG-(11)-AACTGTTA

Gene: Pcar_1600: MoxR-like ATPases
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4
MoxR-like ATPases
Pcar_0521
 
Geobacter sp. M21
 
Geobacter sp. FRC-32
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379
 2
Pelobacter carbinolicus str. DSM 2380

Gene: Pcar_0521: Sll7028 protein

Gene: Pcar_1601: Sll7028 protein
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4
Sll7028 protein
Pcar_0520
 
Geobacter sp. M21
 
Geobacter sp. FRC-32
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379
 2
Pelobacter carbinolicus str. DSM 2380

Gene: Pcar_3306: hypothetical protein

Gene: Pcar_0520: hypothetical protein
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4
hypothetical protein
 
CRON 2.
GSU0019
 
Geobacter sp. M21
 
Geobacter sp. FRC-32
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379
 
Pelobacter carbinolicus str. DSM 2380
 
Geobacter metallireducens GS-15
*
Geobacter sulfurreducens PCA

Site:
position = -151
score = 11.775
sequence = TACAGTCG-(17)-AACAGTTG-(3)-AAATGCCA

Gene: GSU0019: Pentapeptide repeat family protein
 
Geobacter uraniumreducens Rf4
Pentapeptide repeat family protein
 
CRON 3.
GM21_0849
*
Geobacter sp. M21

Site:
position = -187
score = 11.8302
sequence = TACAGTCT-(17)-TACAGCTA-(11)-CAATGCCA

Gene: GM21_0849: Glycosyl transferase, group 2 family protein
 
Geobacter sp. FRC-32
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379

Gene: Ppro_3227: Glycosyl transferase, group 2 family protein
 
Pelobacter carbinolicus str. DSM 2380
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA

Gene: GSU3460: Glycosyl transferase, group 2 family protein
 
Geobacter uraniumreducens Rf4
Glycosyl transferase, group 2 family protein
 
CRON 4.
Gbem_0803
 
Geobacter sp. M21

Gene: GM21_0850: Transcriptional regulator, GntR family
 
Geobacter sp. FRC-32

Gene: Geob_1843: Transcriptional regulator, GntR family
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379
*
Pelobacter carbinolicus str. DSM 2380

Site:
position = -135
score = 10.7711
sequence = CACAGTTT-(17)-AACAGTTA-(11)-ATCTGTTA

Gene: Pcar_1599: Transcriptional regulator, GntR family
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA

Gene: GSU0018: Transcriptional regulator, GntR family
 
Geobacter uraniumreducens Rf4

Gene: Gura_2450: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
 
CRON 5.
Geob_1842
 
Geobacter sp. M21
*
Geobacter sp. FRC-32

Site:
position = -234
score = 11.9175
sequence = TACAGTTC-(17)-AACAGTTG-(12)-AACTGCTG

Gene: Geob_1842: hypothetical protein
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379
 
Pelobacter carbinolicus str. DSM 2380
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4
hypothetical protein
 
CRON 6.
Geob_2471
 
Geobacter sp. M21
 
Geobacter sp. FRC-32

Gene: Geob_2471: alkylhydroperoxidase like protein, AhpD family
 
Geobacter lovleyi SZ

Gene: Glov_1183: alkylhydroperoxidase like protein, AhpD family
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379

Gene: Ppro_0858: alkylhydroperoxidase like protein, AhpD family
 
Pelobacter carbinolicus str. DSM 2380
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA
*2
Geobacter uraniumreducens Rf4

Site:
position = -170
score = 11.901
sequence = TACAGTTT-(17)-AACAGTCT-(12)-AACTGTTA

Gene: Gura_2449: alkylhydroperoxidase like protein, AhpD family

Gene: Gura_1378: alkylhydroperoxidase like protein, AhpD family
alkylhydroperoxidase like protein, AhpD family
Gura_2448
 
Geobacter sp. M21
 
Geobacter sp. FRC-32
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379
 
Pelobacter carbinolicus str. DSM 2380
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4

Gene: Gura_2448: MFS transporter
MFS transporter
Gura_2447
 
Geobacter sp. M21
 
Geobacter sp. FRC-32
 
Geobacter lovleyi SZ
 
Desulfuromonas acetoxidans DSM 684
 
Pelobacter propionicus DSM 2379
 
Pelobacter carbinolicus str. DSM 2380
 
Geobacter metallireducens GS-15
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4

Gene: Gura_2447: hypothetical protein
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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