Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog YdcR - Moraxellaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acinetobacter baumannii AB0057 3 2
Acinetobacter sp. ADP1 1 1
Psychrobacter arcticum 273-4
Psychrobacter sp. PRwf-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF01654
*
Acinetobacter baumannii AB0057

Site:
position = -377
score = 8.96017
sequence = AACTGTTATAGTTTT-(9)-TTCTGTATCTACATA

Gene: AB57_1667: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
 
Acinetobacter sp. ADP1
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
PF02322
 
Acinetobacter baumannii AB0057

Gene: AB57_1666: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
 
Acinetobacter sp. ADP1
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
 
CRON 2.
AB57_1669
*
Acinetobacter baumannii AB0057

Site:
position = -260
score = 6.56477
sequence = GCGTGCTATAGTTTT-(9)-ATCTGTAGCTATATA

Gene: AB57_1669: hypothetical protein
*
Acinetobacter sp. ADP1

Site:
position = -107
score = 9.68618
sequence = AACTGTTATAGTTTT-(9)-GACTGTTTCTATTTT

Gene: ACIAD2031: hypothetical protein
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD