Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog H16_B1468 - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis 4 3
Ralstonia eutropha H16 7 3
Ralstonia eutropha JMP134 6 2
Ralstonia metallidurans CH34 3 1
Ralstonia pickettii 12J
Ralstonia solanacearum GMI1000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fdhA2
*
Cupriavidus taiwanensis

Site:
position = -147
score = 8.3044
sequence = CACTGTACTCCCTGC-(10)-ATTTGTACACACCGG

Gene: RALTA_B1736: Putative formate dehydrogenase oxidoreductase protein
*
Ralstonia eutropha H16

Site:
position = -146
score = 6.57554
sequence = AACTGTGCTCCCCGG-(10)-CTTTGTATGTACCCG

Gene: H16_B1471: Putative formate dehydrogenase oxidoreductase protein
*
Ralstonia eutropha JMP134

Site:
position = -132
score = 7.78479
sequence = AACTGTGCTCTTGAA-(10)-GTCTGTACGCACCGC

Gene: Reut_B4091: Putative formate dehydrogenase oxidoreductase protein
*
Ralstonia metallidurans CH34

Site:
position = -66
score = 7.51191
sequence = AACTGTACTCTTCCT-(10)-TTCTGTACGTCACGG

Gene: Rmet_1124: Putative formate dehydrogenase oxidoreductase protein
 
Ralstonia pickettii 12J

Gene: Rpic_4280: Putative formate dehydrogenase oxidoreductase protein
 2
Ralstonia solanacearum GMI1000

Gene: RS02385: Putative formate dehydrogenase oxidoreductase protein

Gene: RS02045: Putative formate dehydrogenase oxidoreductase protein
Putative formate dehydrogenase oxidoreductase protein
fdhD2
 
Cupriavidus taiwanensis

Gene: RALTA_B1735: formate dehydrogenase family accessory protein FdhD
 
Ralstonia eutropha H16

Gene: H16_B1470: formate dehydrogenase family accessory protein FdhD
 
Ralstonia eutropha JMP134

Gene: Reut_B4092: formate dehydrogenase family accessory protein FdhD
 
Ralstonia metallidurans CH34

Gene: Rmet_1125: formate dehydrogenase family accessory protein FdhD
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
formate dehydrogenase family accessory protein FdhD
moeA3
 
Cupriavidus taiwanensis

Gene: RALTA_B1734: Molybdopterin biosynthesis protein MoeA
 
Ralstonia eutropha H16

Gene: H16_B1469: Molybdopterin biosynthesis protein MoeA
 
Ralstonia eutropha JMP134

Gene: Reut_B4093: Molybdopterin biosynthesis protein MoeA
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Molybdopterin biosynthesis protein MoeA
h16_B1468
 
Cupriavidus taiwanensis

Gene: RALTA_B1733: Transcriptional regulator, GntR family
 
Ralstonia eutropha H16

Gene: H16_B1468: Transcriptional regulator, GntR family
 
Ralstonia eutropha JMP134

Gene: Reut_B4094: Transcriptional regulator, GntR family
 
Ralstonia metallidurans CH34

Gene: Rmet_1126: Transcriptional regulator, GntR family
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Transcriptional regulator, GntR family
 
CRON 2.
moaA
*
Cupriavidus taiwanensis

Site:
position = -130
score = 6.51028
sequence = AACTGTTCTGCTTGC-(10)-CTTTGTACGCCTGCG

Gene: RALTA_B1731: molybdopterin biosynthesis protein
*
Ralstonia eutropha H16

Site:
position = -70
score = 7.10247
sequence = AACTGTTCTGCTTCC-(10)-ATTTGTACGCCTGCC

Gene: H16_B1466: molybdopterin biosynthesis protein
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
molybdopterin biosynthesis protein
 
CRON 3.
cydA
*
Cupriavidus taiwanensis

Site:
position = -123
score = 6.4677
sequence = AACTGAGCTTGCCCA-(10)-AACTGTATCCCTGCC

Gene: RALTA_B1725: Cytochrome bd ubiquinol oxidase, subunit I
*
Ralstonia eutropha H16

Site:
position = -283
score = 6.36086
sequence = AACTGAGCTTGAACG-(10)-AACTGTATCCCTAGC

Gene: H16_B1461: Cytochrome bd ubiquinol oxidase, subunit I
*
Ralstonia eutropha JMP134

Site:
position = -123
score = 6.76585
sequence = AACTGAGCTTGCGCA-(10)-AACTGTACCCCTCCC

Gene: Reut_B4101: Cytochrome bd ubiquinol oxidase, subunit I
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Cytochrome bd ubiquinol oxidase, subunit I
cydB
 
Cupriavidus taiwanensis

Gene: RALTA_B1726: Cytochrome bd ubiquinol oxidase, subunit II
 
Ralstonia eutropha H16

Gene: H16_B1462: Cytochrome bd ubiquinol oxidase, subunit II
 
Ralstonia eutropha JMP134

Gene: Reut_B4100: Cytochrome bd ubiquinol oxidase, subunit II
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Cytochrome bd ubiquinol oxidase, subunit II
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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