Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog BPSS0970 - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia cepacia AMMD 2 1
Burkholderia glumae BGR1 1 1
Burkholderia mallei ATCC 23344 2 1
Burkholderia phymatum STM815 1 1
Burkholderia pseudomallei K96243 2 1
Burkholderia sp. 383 2 1
Burkholderia vietnamiensis G4 2 1
Burkholderia xenovorans LB400 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fdhA2
*
Burkholderia cepacia AMMD

Site:
position = -91
score = 9.47206
sequence = AACTGTACTCTTTTT-(10)-AGGTGTACACACAGC

Gene: Bamb_4006: Putative formate dehydrogenase oxidoreductase protein
*
Burkholderia glumae BGR1

Site:
position = -106
score = 8.78434
sequence = AACTGTACTCTTTTT-(10)-AGGTGTGTACCCATG

Gene: bglu_2g13880: Putative formate dehydrogenase oxidoreductase protein
*
Burkholderia mallei ATCC 23344

Site:
position = -66
score = 9.13259
sequence = AACTGTGCTCTTTTT-(10)-AGGTGTGCTCCCGCC

Gene: BMAA1254: Putative formate dehydrogenase oxidoreductase protein
*
Burkholderia phymatum STM815

Site:
position = -97
score = 8.65239
sequence = AACTGTACTCTTTTT-(10)-TTGTGTACACGCCGG

Gene: Bphy_4743: Putative formate dehydrogenase oxidoreductase protein
*
Burkholderia pseudomallei K96243

Site:
position = -108
score = 9.13259
sequence = AACTGTGCTCTTTTT-(10)-AGGTGTGCTCCCGCC

Gene: BPSS0969: Putative formate dehydrogenase oxidoreductase protein
*
Burkholderia sp. 383

Site:
position = -93
score = 9.47206
sequence = AACTGTACTCTTTTT-(10)-AGGTGTACACACAGC

Gene: Bcep18194_B1265: Putative formate dehydrogenase oxidoreductase protein
*
Burkholderia vietnamiensis G4

Site:
position = -90
score = 9.47206
sequence = AACTGTACTCTTTTT-(10)-AGGTGTACACACAGC

Gene: Bcep1808_5104: Putative formate dehydrogenase oxidoreductase protein
*
Burkholderia xenovorans LB400

Site:
position = -111
score = 7.59561
sequence = AACTGTATCCCTCCC-(10)-TTCTGTATGCTGCGC

Gene: Bxe_A1486: Putative formate dehydrogenase oxidoreductase protein
Putative formate dehydrogenase oxidoreductase protein
COG3781
 
Burkholderia cepacia AMMD

Gene: Bamb_4007: putative membrane protein
 
Burkholderia glumae BGR1

Gene: bglu_2g13890: putative membrane protein
 
Burkholderia mallei ATCC 23344

Gene: BMAA1255: putative membrane protein
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243

Gene: BPSS0968: putative membrane protein
 
Burkholderia sp. 383

Gene: Bcep18194_B1264: putative membrane protein
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_5105: putative membrane protein
 
Burkholderia xenovorans LB400
putative membrane protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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