Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Bxe_A4302 - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia cepacia AMMD
Burkholderia phymatum STM815
Burkholderia pseudomallei K96243
Burkholderia sp. 383
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG0235
 
Burkholderia glumae BGR1

Gene: bglu_1g13050: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
 
Burkholderia mallei ATCC 23344

Gene: BMA1957: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
 
Burkholderia cepacia AMMD

Gene: Bamb_4893: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243

Gene: BPSL0937: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
 
Burkholderia sp. 383

Gene: Bcep18194_B0077: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
 
Burkholderia vietnamiensis G4
*
Burkholderia xenovorans LB400

Site:
position = -152
score = 12.2679
sequence = TTCTGGACCA-(13)-ATCTGGATGT-(6)-TGGTCCACAA

Gene: Bxe_A4303: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
COG0329
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344

Gene: BMA1958: Dihydrodipicolinate synthase
 
Burkholderia cepacia AMMD

Gene: Bamb_4892: Dihydrodipicolinate synthase
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243

Gene: BPSL0936: Dihydrodipicolinate synthase
 
Burkholderia sp. 383

Gene: Bcep18194_B0078: Dihydrodipicolinate synthase
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400

Gene: Bxe_A4304: Dihydrodipicolinate synthase
Dihydrodipicolinate synthase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD