Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cpin_6695 - Sphingobacteria

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Algoriphagus sp. PR1
Chitinophaga pinensis DSM 2588 1 1
Cytophaga hutchinsonii ATCC 33406
Dyadobacter fermentans DSM 18053
Microscilla marina ATCC 23134
Pedobacter heparinus DSM 2366
Pedobacter sp. BAL39
Salinibacter ruber DSM 13855
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
SSF55729
 
Algoriphagus sp. PR1
*
Chitinophaga pinensis DSM 2588

Site:
position = -86
score = 6.72866
sequence = ATCTGTACTGG-(13)-ATGTGTACAAT

Gene: Cpin_6694: Acyl-CoA N-acyltransferase
 
Cytophaga hutchinsonii ATCC 33406
 
Dyadobacter fermentans DSM 18053
 
Microscilla marina ATCC 23134
 
Pedobacter heparinus DSM 2366
 
Pedobacter sp. BAL39
 
Salinibacter ruber DSM 13855
Acyl-CoA N-acyltransferase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD