Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PdxR - Pasteurellales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine biosynthesis
Effector: Pyridoxal-5-phosphate
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Haemophilus ducreyi 35000HP 2 1
Haemophilus influenzae Rd KW20
Haemophilus parasuis SH0165
Haemophilus somnus 2336
Mannheimia succiniciproducens MBEL55E
Pasteurella multocida subsp. multocida str. Pm70 2 1
Actinobacillus pleuropneumoniae serovar 7 str. AP76 2 1
Actinobacillus succinogenes 130Z
Aggregatibacter aphrophilus NJ8700
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pdxS
*
Haemophilus ducreyi 35000HP

Site:
position = -100
score = 12.447
sequence = TCTGACCT-(16)-ATTGATAC-(8)-ATATCTGT

Gene: HD1593: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Haemophilus influenzae Rd KW20

Gene: HI1647: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Haemophilus parasuis SH0165
 
Haemophilus somnus 2336
 
Mannheimia succiniciproducens MBEL55E
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -108
score = 10.8393
sequence = TCTGACCT-(16)-TTTGACAC-(8)-ATACCTAA

Gene: PM1232: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -98
score = 12.2188
sequence = TCTGACCT-(16)-ATTGATGC-(8)-ATATCTGT

Gene: APP7_0616: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Actinobacillus succinogenes 130Z
 
Aggregatibacter aphrophilus NJ8700
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
pdxT
 
Haemophilus ducreyi 35000HP

Gene: HD1592: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Haemophilus influenzae Rd KW20

Gene: HI1648: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Haemophilus parasuis SH0165
 
Haemophilus somnus 2336
 
Mannheimia succiniciproducens MBEL55E
 
Pasteurella multocida subsp. multocida str. Pm70

Gene: PM1233: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Gene: APP7_0617: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Actinobacillus succinogenes 130Z
 
Aggregatibacter aphrophilus NJ8700
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD