Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HCH_03332 - Oceanospirillales/Alteromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043
Hahella chejuensis KCTC 2396 3 1
Marinomonas sp. MWYL1
Reinekea sp. MED297
Oceanospirillum sp. MED92
Oceanobacter sp. RED65
Teredinibacter turnerae T7901
Saccharophagus degradans 2-40
Marinobacter aqueolei
Marinobacter sp. ELB17
Cellvibrio japonicus Ueda107
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF02525
 
Alcanivorax borkumensis SK2
 
Chromohalobacter salexigens DSM 3043
*
Hahella chejuensis KCTC 2396

Site:
position = -246
score = 10.5748
sequence = CTATGTCCTACC-(12)-TTTTGTACCCTT-(2)-AGTACGTCATTT

Gene: HCH_03333: FMN-dependent NADH-azoreductase
 
Marinomonas sp. MWYL1
 
Reinekea sp. MED297
 
Oceanospirillum sp. MED92
 
Oceanobacter sp. RED65
 
Teredinibacter turnerae T7901
 
Saccharophagus degradans 2-40
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Cellvibrio japonicus Ueda107
FMN-dependent NADH-azoreductase
PF00578
 
Alcanivorax borkumensis SK2
 
Chromohalobacter salexigens DSM 3043
 
Hahella chejuensis KCTC 2396

Gene: HCH_03334: AhpC/TSA family protein
 
Marinomonas sp. MWYL1
 
Reinekea sp. MED297
 
Oceanospirillum sp. MED92
 
Oceanobacter sp. RED65
 
Teredinibacter turnerae T7901
 
Saccharophagus degradans 2-40
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Cellvibrio japonicus Ueda107
AhpC/TSA family protein
COG4232
 
Alcanivorax borkumensis SK2
 
Chromohalobacter salexigens DSM 3043
 
Hahella chejuensis KCTC 2396

Gene: HCH_03335: putative thiol:disulfide interchange protein
 
Marinomonas sp. MWYL1
 
Reinekea sp. MED297
 
Oceanospirillum sp. MED92
 
Oceanobacter sp. RED65
 
Teredinibacter turnerae T7901
 
Saccharophagus degradans 2-40
 
Marinobacter aqueolei
 
Marinobacter sp. ELB17
 
Cellvibrio japonicus Ueda107
putative thiol:disulfide interchange protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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