Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Fjoh_0145 - Flavobacteria

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Bacteroidetes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Blattabacterium sp. (Blattella germanica) str. Bge
Candidatus Sulcia muelleri SMDSEM
Capnocytophaga ochracea DSM 7271
Cellulophaga sp. MED134
Croceibacter atlanticus HTCC2559
Flavobacteria bacterium BBFL7
Flavobacteria bacterium BAL38
Flavobacteriaceae bacterium 3519-10
Flavobacteriales bacterium HTCC2170
Flavobacteriales bacterium ALC-1
Flavobacterium psychrophilum JIP02/86
Flavobacterium johnsoniae UW101 4 2
Leeuwenhoekiella blandensis MED217
Kordia algicida OT-1
Gramella forsetii KT0803
Robiginitalea biformata HTCC2501
Psychroflexus torquis ATCC 700755
Polaribacter irgensii 23-P
Tenacibaculum sp. MED152
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF00892
 
Blattabacterium sp. (Blattella germanica) str. Bge
 
Candidatus Sulcia muelleri SMDSEM
 
Capnocytophaga ochracea DSM 7271
 
Cellulophaga sp. MED134
 
Croceibacter atlanticus HTCC2559
 
Flavobacteria bacterium BBFL7
 
Flavobacteria bacterium BAL38
 
Flavobacteriaceae bacterium 3519-10
 
Flavobacteriales bacterium HTCC2170
 
Flavobacteriales bacterium ALC-1
 
Flavobacterium psychrophilum JIP02/86

Gene: FP1609: Transporter, LysE family
*
Flavobacterium johnsoniae UW101

Site:
position = -89
score = 8.16213
sequence = AACTGTTAT-(21)-ATCTGTATT

Gene: Fjoh_3395: Transporter, LysE family
 
Leeuwenhoekiella blandensis MED217
 
Kordia algicida OT-1
 
Gramella forsetii KT0803
 
Robiginitalea biformata HTCC2501
 
Psychroflexus torquis ATCC 700755
 
Polaribacter irgensii 23-P
 
Tenacibaculum sp. MED152
Transporter, LysE family
 
CRON 2.
Fjoh_0144
 
Blattabacterium sp. (Blattella germanica) str. Bge
 
Candidatus Sulcia muelleri SMDSEM
 
Capnocytophaga ochracea DSM 7271
 
Cellulophaga sp. MED134
 
Croceibacter atlanticus HTCC2559
 
Flavobacteria bacterium BBFL7
 
Flavobacteria bacterium BAL38
 
Flavobacteriaceae bacterium 3519-10
 
Flavobacteriales bacterium HTCC2170
 
Flavobacteriales bacterium ALC-1
 
Flavobacterium psychrophilum JIP02/86
*
Flavobacterium johnsoniae UW101

Site:
position = -75
score = 7.71028
sequence = ATCTGTACC-(21)-ATCTGTACC

Gene: Fjoh_0144: hypothetical protein
 
Leeuwenhoekiella blandensis MED217
 
Kordia algicida OT-1
 
Gramella forsetii KT0803
 
Robiginitalea biformata HTCC2501
 
Psychroflexus torquis ATCC 700755
 
Polaribacter irgensii 23-P
 
Tenacibaculum sp. MED152
hypothetical protein
Fjoh_0145
 
Blattabacterium sp. (Blattella germanica) str. Bge
 
Candidatus Sulcia muelleri SMDSEM
 
Capnocytophaga ochracea DSM 7271
 
Cellulophaga sp. MED134
 
Croceibacter atlanticus HTCC2559
 
Flavobacteria bacterium BBFL7
 
Flavobacteria bacterium BAL38
 
Flavobacteriaceae bacterium 3519-10
 
Flavobacteriales bacterium HTCC2170
 
Flavobacteriales bacterium ALC-1
 
Flavobacterium psychrophilum JIP02/86
 
Flavobacterium johnsoniae UW101

Gene: Fjoh_0145: Transcriptional regulator, GntR family
 
Leeuwenhoekiella blandensis MED217
 
Kordia algicida OT-1
 
Gramella forsetii KT0803
 
Robiginitalea biformata HTCC2501
 
Psychroflexus torquis ATCC 700755
 
Polaribacter irgensii 23-P
 
Tenacibaculum sp. MED152
Transcriptional regulator, GntR family
PF00583
 
Blattabacterium sp. (Blattella germanica) str. Bge
 
Candidatus Sulcia muelleri SMDSEM
 
Capnocytophaga ochracea DSM 7271
 
Cellulophaga sp. MED134
 
Croceibacter atlanticus HTCC2559
 
Flavobacteria bacterium BBFL7
 
Flavobacteria bacterium BAL38
 
Flavobacteriaceae bacterium 3519-10
 
Flavobacteriales bacterium HTCC2170
 
Flavobacteriales bacterium ALC-1
 
Flavobacterium psychrophilum JIP02/86
 
Flavobacterium johnsoniae UW101

Gene: Fjoh_0146: GCN5-related N-acetyltransferase (GNAT) domain
 
Leeuwenhoekiella blandensis MED217
 
Kordia algicida OT-1
 
Gramella forsetii KT0803
 
Robiginitalea biformata HTCC2501
 
Psychroflexus torquis ATCC 700755
 
Polaribacter irgensii 23-P
 
Tenacibaculum sp. MED152
GCN5-related N-acetyltransferase (GNAT) domain
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD