Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SCO4836 - Streptomycetaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptomyces avermitilis MA-4680 3 3
Streptomyces coelicolor A3(2) 3 2
Streptomyces griseus subsp. griseus NBRC 13350 3 3
Streptomyces scabiei 87.22 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pcaC
*
Streptomyces avermitilis MA-4680

Site:
position = -64
score = 9.03729
sequence = GAATTGACCCAT-(12)-GAAATGAACCAT

Gene: SAV_6257: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
 
Streptomyces coelicolor A3(2)
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -70
score = 8.55717
sequence = GAATTGACCCAT-(12)-GAAATGCACCCC

Gene: SGR_5307: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
*
Streptomyces scabiei 87.22

Site:
position = -70
score = 8.55717
sequence = GAATTGACCCAC-(12)-GAAATGCACCCT

Site:
position = -94
score = 7.08245
sequence = AGATCGGCCCCG-(12)-GAATTGACCCAC

Gene: SCAB_69301: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
 
CRON 2.
PF00892
*
Streptomyces avermitilis MA-4680

Site:
position = -70
score = 8.30717
sequence = GCATTGGTCCCC-(12)-GAAGTGGACCTT

Gene: SAV_7066: Permeases of the drug/metabolite transporter (DMT) superfamily
*
Streptomyces coelicolor A3(2)

Site:
position = -70
score = 8.14406
sequence = GGATTGGTCCCC-(12)-GAAGTGGACCCC

Gene: SCO7394: Permeases of the drug/metabolite transporter (DMT) superfamily
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -70
score = 8.30717
sequence = GCATTGGTCCCC-(12)-GAAGTGGACCTT

Gene: SGR_6262: Permeases of the drug/metabolite transporter (DMT) superfamily
 
Streptomyces scabiei 87.22
Permeases of the drug/metabolite transporter (DMT) superfamily
 
CRON 3.
pcaC2
*
Streptomyces avermitilis MA-4680

Site:
position = -70
score = 8.58309
sequence = AAAGTGGCCCAA-(12)-TAAATGGACCAT

Gene: SAV_3428: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
*2
Streptomyces coelicolor A3(2)

Site:
position = -70
score = 8.68102
sequence = AGAGTGGCCCAG-(12)-GAAATGGACCAT

Gene: SCO4835: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein

Gene: SCO4834: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -70
score = 8.31964
sequence = AAAGTGGCCCAG-(12)-CCAATGGACCAT

Gene: SGR_2707: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
 
Streptomyces scabiei 87.22
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD