Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PdxR2 - Deinococcus-Thermus

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine/pyridoxal homeostasis
Effector: Pyridoxal-5-phosphate
Phylum: Deinococcus-Thermus
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Deinococcus deserti VCD115 2 1
Deinococcus geothermalis DSM 11300
Deinococcus radiodurans R1
Thermus aquaticus Y51MC23
Thermus thermophilus HB27
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF00583
*
Deinococcus deserti VCD115

Site:
position = -68
score = 10.7374
sequence = ATTGGTTGGT-(14)-ATTGGATCTT-(4)-ACTGACCAAT

Gene: Deide_3p01050: GCN5-related N-acetyltransferase (GNAT) domain
 
Deinococcus geothermalis DSM 11300
 
Deinococcus radiodurans R1
 
Thermus aquaticus Y51MC23
 
Thermus thermophilus HB27
GCN5-related N-acetyltransferase (GNAT) domain
pdxO
 
Deinococcus deserti VCD115

Gene: Deide_3p01040: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
 
Deinococcus geothermalis DSM 11300
 
Deinococcus radiodurans R1
 
Thermus aquaticus Y51MC23
 
Thermus thermophilus HB27
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD