Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CV1900 - Various betaproteobacteria

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Azoarcus sp. EbN1
Dechloromonas aromatica RCB
Thauera sp. MZ1T
Chromobacterium violaceum ATCC 12472 3 3
Laribacter hongkongensis HLHK9
Neisseria meningitidis MC58
Methylobacillus flagellatus KT
Methylophilales bacterium HTCC2181
Methylotenera mobilis JLW8
Nitrosomonas europaea ATCC 19718
Nitrosospira multiformis ATCC 25196
Thiobacillus denitrificans
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
CV1900
 
Azoarcus sp. EbN1
 
Dechloromonas aromatica RCB
 
Thauera sp. MZ1T
*2
Chromobacterium violaceum ATCC 12472

Gene: CV1900: Transcriptional regulator, GntR family

Site:
position = -110
score = 7.75869
sequence = AATTGAGACCATAA-(17)-AACTGTTACGGTCG

Gene: CV1935: Transcriptional regulator, GntR family
 
Laribacter hongkongensis HLHK9
 
Neisseria meningitidis MC58
 
Methylobacillus flagellatus KT
 
Methylophilales bacterium HTCC2181
 
Methylotenera mobilis JLW8
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
Transcriptional regulator, GntR family
 
CRON 2.
PF01810
 
Azoarcus sp. EbN1
 
Dechloromonas aromatica RCB
 
Thauera sp. MZ1T
*
Chromobacterium violaceum ATCC 12472

Site:
position = -115
score = 9.18793
sequence = ATCTGTAACCAGAT-(17)-ATCTGTATCCATCA

Gene: CV1901: Transporter, LysE family
 
Laribacter hongkongensis HLHK9
 
Neisseria meningitidis MC58
 
Methylobacillus flagellatus KT
 
Methylophilales bacterium HTCC2181
 
Methylotenera mobilis JLW8
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
Transporter, LysE family
 
CRON 3.
PF01810
 
Azoarcus sp. EbN1
 
Dechloromonas aromatica RCB
 
Thauera sp. MZ1T
*
Chromobacterium violaceum ATCC 12472

Site:
position = -132
score = 6.30528
sequence = AACTGTTATGGTCT-(17)-ATCTGTAATTGTCC

Gene: CV1936: Transporter, LysE family
 
Laribacter hongkongensis HLHK9
 
Neisseria meningitidis MC58
 
Methylobacillus flagellatus KT
 
Methylophilales bacterium HTCC2181
 
Methylotenera mobilis JLW8
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
Transporter, LysE family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD