Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog BPSS1200 - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia cepacia AMMD 1 1
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815 1 1
Burkholderia pseudomallei K96243 2 1
Burkholderia sp. 383 2 1
Burkholderia vietnamiensis G4 2 1
Burkholderia xenovorans LB400 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF02627
*
Burkholderia cepacia AMMD

Site:
position = -107
score = 12.5418
sequence = ACTGGTTAC-(15)-ATTGGCCAT-(5)-CAGGCCAGT

Gene: Bamb_3693: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
*
Burkholderia phymatum STM815

Site:
position = -107
score = 13.1537
sequence = AGTGGTCAC-(15)-ATTGGCCAT-(5)-ATGGCCAGT

Gene: Bphy_4060: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
*
Burkholderia pseudomallei K96243

Site:
position = -118
score = 12.6856
sequence = GGCGGTCTC-(15)-ATTGGCTAT-(5)-ATAGCCACC

Gene: BPSS1201: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
*
Burkholderia sp. 383

Site:
position = -107
score = 12.4822
sequence = ACTGGTTAC-(15)-ATTGGCCAT-(5)-CAGGCCAGC

Gene: Bcep18194_B1741: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
*
Burkholderia vietnamiensis G4

Site:
position = -107
score = 12.4674
sequence = GGTGGTCAC-(15)-ATTGGTCAT-(5)-CGGGCCAGT

Gene: Bcep1808_4831: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
*
Burkholderia xenovorans LB400

Site:
position = -109
score = 10.9893
sequence = AGTGGTTAC-(15)-ACTGGTCAT-(5)-GAGTCCAAT

Gene: Bxe_B1427: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
PF02525
 
Burkholderia cepacia AMMD
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400

Gene: Bxe_B1426: FMN-dependent NADH-azoreductase
FMN-dependent NADH-azoreductase
PF07883
 
Burkholderia cepacia AMMD
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243

Gene: BPSS1202: Cupin 2, conserved barrel
 
Burkholderia sp. 383

Gene: Bcep18194_B1742: Cupin 2, conserved barrel
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_4830: Cupin 2, conserved barrel
 
Burkholderia xenovorans LB400

Gene: Bxe_B1425: Cupin 2, conserved barrel
Cupin 2, conserved barrel
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD