Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog GabR - Moraxellaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Gamma-aminobutyrate utilization
Effector: Gamma-aminobutyric acid
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acinetobacter baumannii AB0057 2 1
Acinetobacter sp. ADP1 3 2
Psychrobacter arcticum 273-4
Psychrobacter sp. PRwf-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
gabT
*
Acinetobacter baumannii AB0057

Site:
position = -156
score = 14.0793
sequence = TTGGCTCT-(16)-GTGGCTCT-(5)-GTTGGCAT

Gene: AB57_3728: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
*
Acinetobacter sp. ADP1

Site:
position = -152
score = 13.6737
sequence = TTGGCTCT-(16)-GTGGCTCT-(5)-GTTGACGC

Gene: ACIAD3446: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
gabD
 
Acinetobacter baumannii AB0057

Gene: AB57_3727: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
 
Acinetobacter sp. ADP1

Gene: ACIAD3445: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
 
CRON 2.
gabP
 
Acinetobacter baumannii AB0057

Gene: AB57_3730: Gamma-aminobutyrate permease
*
Acinetobacter sp. ADP1

Site:
position = -218
score = 11.3042
sequence = TTGGCTCT-(16)-ATGGCTCT-(5)-ATTGAGAC

Gene: ACIAD3448: Gamma-aminobutyrate permease
 
Psychrobacter arcticum 273-4
 
Psychrobacter sp. PRwf-1
Gamma-aminobutyrate permease
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD