Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog ArgR - Francisellaceae

Properties
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode:
Biological process: Arginine biosynthesis
Effector: Arginine
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Francisella novicida FTE
Francisella philomiragia subsp. philomiragia ATCC 25017 8 3
Francisella tularensis subsp. tularensis SCHU S4
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
argC
 
Francisella novicida FTE
*
Francisella philomiragia subsp. philomiragia ATCC 25017

Site:
position = -125
score = 5.33571
sequence = AATGAATAAATAAACACA

Site:
position = -73
score = 5.7935
sequence = GGTAAATAATTATTCACA

Gene: Fphi_0556: N-acetyl-gamma-glutamyl-phosphate reductas (EC 1.2.1.38)
 
Francisella tularensis subsp. tularensis SCHU S4
N-acetyl-gamma-glutamyl-phosphate reductas (EC 1.2.1.38)
argJ
 
Francisella novicida FTE
 
Francisella philomiragia subsp. philomiragia ATCC 25017

Gene: Fphi_0557: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
 
Francisella tularensis subsp. tularensis SCHU S4
Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
argB
 
Francisella novicida FTE
 
Francisella philomiragia subsp. philomiragia ATCC 25017

Gene: Fphi_0558: Acetylglutamate kinase (EC 2.7.2.8)
 
Francisella tularensis subsp. tularensis SCHU S4
Acetylglutamate kinase (EC 2.7.2.8)
argF
 
Francisella novicida FTE
 
Francisella philomiragia subsp. philomiragia ATCC 25017

Gene: Fphi_0559: Ornithine carbamoyltransferase (EC 2.1.3.3)
 
Francisella tularensis subsp. tularensis SCHU S4
Ornithine carbamoyltransferase (EC 2.1.3.3)
 
CRON 2.
argD
 
Francisella novicida FTE
*
Francisella philomiragia subsp. philomiragia ATCC 25017

Site:
position = -89
score = 5.7935
sequence = TGTGAATAATTATTTACC

Site:
position = -37
score = 5.33571
sequence = TGTGTTTATTTATTCATT

Gene: Fphi_0554: Ornithine aminotransferase (EC 2.6.1.13)
 
Francisella tularensis subsp. tularensis SCHU S4
Ornithine aminotransferase (EC 2.6.1.13)
 
CRON 3.
argG
 
Francisella novicida FTE
*
Francisella philomiragia subsp. philomiragia ATCC 25017

Site:
position = -95
score = 5.6879
sequence = TATAAATATTTATTCACT

Site:
position = -34
score = 5.57372
sequence = AATGAATAAATATTCAAA

Gene: Fphi_0552: Argininosuccinate synthase (EC 6.3.4.5)
 
Francisella tularensis subsp. tularensis SCHU S4
Argininosuccinate synthase (EC 6.3.4.5)
argH
 
Francisella novicida FTE
 
Francisella philomiragia subsp. philomiragia ATCC 25017

Gene: Fphi_0553: Argininosuccinate lyase (EC 4.3.2.1)
 
Francisella tularensis subsp. tularensis SCHU S4
Argininosuccinate lyase (EC 4.3.2.1)
argR
 
Francisella novicida FTE
 
Francisella philomiragia subsp. philomiragia ATCC 25017

Gene: Fphi_0555: Arginine metabolism transcriptional regulator ArgR, ArgR family
 
Francisella tularensis subsp. tularensis SCHU S4
Arginine metabolism transcriptional regulator ArgR, ArgR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD