Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Bpet3002 - Alcaligenaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bordetella avium 197N
Bordetella bronchiseptica RB50
Bordetella petrii DSM 12804 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG1917
 
Bordetella avium 197N
 
Bordetella bronchiseptica RB50

Gene: BB1210: Uncharacterized conserved protein, contains double-stranded beta-helix domain
*
Bordetella petrii DSM 12804

Site:
position = -91
score = 8.53596
sequence = TTGTAGTACA-(14)-TTTTGGTGCT

Gene: Bpet3003: Uncharacterized conserved protein, contains double-stranded beta-helix domain
Uncharacterized conserved protein, contains double-stranded beta-helix domain
COG2128
 
Bordetella avium 197N
 
Bordetella bronchiseptica RB50

Gene: BB1211: Uncharacterized conserved protein
 
Bordetella petrii DSM 12804

Gene: Bpet3004: Uncharacterized conserved protein
Uncharacterized conserved protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD