Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PdxQ3 - Nocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine/pyridoxal homeostasis
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Nocardia farcinica IFM 10152 1 1
Rhodococcus erythropolis PR4
Rhodococcus opacus B4
Rhodococcus sp. RHA1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG2050
*2
Nocardia farcinica IFM 10152

Gene: nfa48150: Uncharacterized protein, possibly involved in aromatic compounds catabolism

Site:
position = -56
score = 11.3568
sequence = ACTGTACC-(1)-AGGACAAT-(6)-ATCGTCCT

Gene: nfa20270: Uncharacterized protein, possibly involved in aromatic compounds catabolism
 
Rhodococcus erythropolis PR4
 
Rhodococcus opacus B4
 
Rhodococcus sp. RHA1
Uncharacterized protein, possibly involved in aromatic compounds catabolism
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD