Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PdxQ3 - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport; Pyridoxine/pyridoxal homeostasis
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis
Ralstonia eutropha H16 2 1
Ralstonia eutropha JMP134
Ralstonia metallidurans CH34
Ralstonia pickettii 12J
Ralstonia solanacearum GMI1000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF01810
 
Cupriavidus taiwanensis
*
Ralstonia eutropha H16

Site:
position = -82
score = 10.9682
sequence = TTTGTATC-(1)-AGAACAAT-(6)-CGTGTATC

Gene: H16_B1958: Lysine-type exporter protein (LYSE/YGGA)
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Lysine-type exporter protein (LYSE/YGGA)
PF03992
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1959: Antibiotic biosynthesis monooxygenase DUF4188
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J

Gene: Rpic_0132: Antibiotic biosynthesis monooxygenase DUF4188
 
Ralstonia solanacearum GMI1000

Gene: RS03249: Antibiotic biosynthesis monooxygenase DUF4188
Antibiotic biosynthesis monooxygenase DUF4188
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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