Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Bamb_4265 - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia cepacia AMMD 1 1
Burkholderia glumae BGR1 1 1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815
Burkholderia pseudomallei K96243
Burkholderia sp. 383 1 1
Burkholderia vietnamiensis G4 1 1
Burkholderia xenovorans LB400
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG697
*
Burkholderia cepacia AMMD

Site:
position = -117
score = 16.5894
sequence = AACTGTACGGT-(7)-CCAGTACAGTT-(6)-AATTGTATTGG

Gene: Bamb_4264: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)
*
Burkholderia glumae BGR1

Site:
position = -116
score = 15.0588
sequence = ATCTGTACGGC-(7)-TCAGTACAGTT-(6)-AATTGTGCTGC

Gene: bglu_2g04000: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
*
Burkholderia sp. 383

Site:
position = -116
score = 16.8175
sequence = AACTGTACGGC-(7)-CCAGTACAGTT-(6)-AATTGTATTGG

Gene: Bcep18194_B0829: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)
*
Burkholderia vietnamiensis G4

Site:
position = -115
score = 16.2093
sequence = AACTGTACGGA-(7)-TCAGTACAGTT-(6)-AATTGTATTGG

Gene: Bcep1808_5369: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)
 
Burkholderia xenovorans LB400

Gene: Bxe_B1783: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)
Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD