Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog BirA - Listeriaceae

Properties
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Listeria innocua Clip11262 1 1
Listeria monocytogenes EGD-e
Listeria seeligeri serovar 1/2b str. SLCC3954 1 1
Listeria welshimeri serovar 6b str. SLCC5334 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
bioY
*
Listeria innocua Clip11262

Site:
position = -48
score = 9.3221
sequence = ATGTTAAC-(15)-GTTTACAT

Gene: lin0607: Substrate-specific component BioY of biotin ECF transporter
 
Listeria monocytogenes EGD-e
*
Listeria seeligeri serovar 1/2b str. SLCC3954

Site:
position = -48
score = 9.3221
sequence = ATGTTAAC-(15)-GTTTACAT

Gene: lse_0508: Substrate-specific component BioY of biotin ECF transporter
*
Listeria welshimeri serovar 6b str. SLCC5334

Site:
position = -48
score = 9.3221
sequence = ATGTTAAC-(15)-GTTTACAT

Gene: lwe0568: Substrate-specific component BioY of biotin ECF transporter
Substrate-specific component BioY of biotin ECF transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD