Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PhnR2 - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: 2-aminoethylphosphonate utilization
Effector: 2-aminoethylphosphonate
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis 7 2
Ralstonia eutropha H16 7 2
Ralstonia eutropha JMP134 10 4
Ralstonia metallidurans CH34
Ralstonia pickettii 12J
Ralstonia solanacearum GMI1000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
phnR2
*
Cupriavidus taiwanensis

Site:
position = -83
score = 5.22113
sequence = ATTGTTGACAAT

Gene: RALTA_B1650: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family
*
Ralstonia eutropha H16

Site:
position = -83
score = 5.22113
sequence = ATTGTTGACAAT

Gene: H16_B1949: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family
*
Ralstonia eutropha JMP134

Site:
position = -81
score = 5.22113
sequence = ATTGTTGACAAT

Gene: Reut_B3719: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
2-aminoethylphosphonate uptake and metabolism regulator, GntR family
h16_B1948
 
Cupriavidus taiwanensis

Gene: RALTA_B1649: Phosphonoacetate hydrolase (EC 3.11.1.2)
 
Ralstonia eutropha H16

Gene: H16_B1948: Phosphonoacetate hydrolase (EC 3.11.1.2)
 
Ralstonia eutropha JMP134

Gene: Reut_B3720: Phosphonoacetate hydrolase (EC 3.11.1.2)
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Phosphonoacetate hydrolase (EC 3.11.1.2)
h16_B1947
 
Cupriavidus taiwanensis

Gene: RALTA_B1648: Aldehyde dehydrogenase
 
Ralstonia eutropha H16

Gene: H16_B1947: Aldehyde dehydrogenase
 
Ralstonia eutropha JMP134

Gene: Reut_B3721: Aldehyde dehydrogenase
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Aldehyde dehydrogenase
 
CRON 2.
Reut_B5875
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16
*
Ralstonia eutropha JMP134

Site:
position = -45
score = 4.98385
sequence = ACTGTTGACAAT

Gene: Reut_B5875: Transcriptional regulator, GntR family
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Transcriptional regulator, GntR family
Reut_B5876
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16
 
Ralstonia eutropha JMP134

Gene: Reut_B5876: Phosphonoacetate hydrolase (EC 3.11.1.2)
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Phosphonoacetate hydrolase (EC 3.11.1.2)
 
CRON 3.
phnS
*
Cupriavidus taiwanensis

Site:
position = -175
score = 5.22113
sequence = ATTGTCAACAAT

Gene: RALTA_B1651: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
*
Ralstonia eutropha H16

Site:
position = -192
score = 5.22113
sequence = ATTGTCAACAAT

Gene: H16_B1950: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
*
Ralstonia eutropha JMP134

Site:
position = -139
score = 4.98385
sequence = ATTGTCAACAGT

Gene: Reut_B5874: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
phnT
 
Cupriavidus taiwanensis

Gene: RALTA_B1652: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
 
Ralstonia eutropha H16

Gene: H16_B1951: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
 
Ralstonia eutropha JMP134

Gene: Reut_B5873: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
phnUV
 
Cupriavidus taiwanensis

Gene: RALTA_B1653: A2-aminoethylphosphonate ABC transporter, permease protein (TC 3.A.1.9.1)
 
Ralstonia eutropha H16

Gene: H16_B1952: A2-aminoethylphosphonate ABC transporter, permease protein (TC 3.A.1.9.1)
 
Ralstonia eutropha JMP134

Gene: Reut_B5872: A2-aminoethylphosphonate ABC transporter, permease protein (TC 3.A.1.9.1)
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
A2-aminoethylphosphonate ABC transporter, permease protein (TC 3.A.1.9.1)
phnW
 
Cupriavidus taiwanensis

Gene: RALTA_B1654: 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
 
Ralstonia eutropha H16

Gene: H16_B1953: 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
*2
Ralstonia eutropha JMP134

Site:
position = -273
score = 5.22113
sequence = ATTGTCAACAAT

Gene: Reut_B3718: 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)

Gene: Reut_B5871: 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD