Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SdaR - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucuronate utilization; Glucarate utilization; Galactarate utilization
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis 2 1
Ralstonia eutropha H16 2 1
Ralstonia eutropha JMP134 2 1
Ralstonia metallidurans CH34 2 1
Ralstonia pickettii 12J
Ralstonia solanacearum GMI1000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
sdaR
*
Cupriavidus taiwanensis

Site:
position = -32
score = 5.91675
sequence = AAGCTGTCAGACAGCCT

Gene: RALTA_A1241: Predicted regulator of D-glucarate/D-galactarate utilization, GntR family
*
Ralstonia eutropha H16

Site:
position = -31
score = 5.91675
sequence = AAGCTGTCTGACAGCCT

Gene: H16_A1320: Predicted regulator of D-glucarate/D-galactarate utilization, GntR family
*
Ralstonia eutropha JMP134

Site:
position = -34
score = 5.6876
sequence = AATCTGTCTGACAGCCT

Gene: Reut_A1260: Predicted regulator of D-glucarate/D-galactarate utilization, GntR family
*
Ralstonia metallidurans CH34

Site:
position = -32
score = 5.91675
sequence = AAGCTGTCTGACAGCCT

Gene: Rmet_1141: Predicted regulator of D-glucarate/D-galactarate utilization, GntR family
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Predicted regulator of D-glucarate/D-galactarate utilization, GntR family
COG579
 
Cupriavidus taiwanensis

Gene: RALTA_A1240: 2-hydroxyglutarate dehydrogenase
 
Ralstonia eutropha H16

Gene: H16_A1319: 2-hydroxyglutarate dehydrogenase
 
Ralstonia eutropha JMP134

Gene: Reut_A1259: 2-hydroxyglutarate dehydrogenase
 
Ralstonia metallidurans CH34

Gene: Rmet_1140: 2-hydroxyglutarate dehydrogenase
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
2-hydroxyglutarate dehydrogenase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD