Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Bamb_1959 - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Alkanesulfonates utilization
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia cepacia AMMD 6 2
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815
Burkholderia pseudomallei K96243
Burkholderia sp. 383 6 2
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Bamb_1958
*
Burkholderia cepacia AMMD

Site:
position = -307
score = 5.92498
sequence = ACTTGTTATGACAAGA

Gene: Bamb_1958: Predicted alkanesulfonates transporter, MFS superfamily
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
*
Burkholderia sp. 383

Site:
position = -317
score = 5.92498
sequence = ACTTGTTATGACAAGA

Gene: Bcep18194_A5285: Predicted alkanesulfonates transporter, MFS superfamily
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
Predicted alkanesulfonates transporter, MFS superfamily
 
CRON 2.
Bamb_1959
*
Burkholderia cepacia AMMD

Site:
position = -22
score = 5.92498
sequence = TCTTGTCATAACAAGT

Gene: Bamb_1959: Putative alkanesulfonate metabolism utilization regulator, GntR family
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
*
Burkholderia sp. 383

Site:
position = -22
score = 5.92498
sequence = TCTTGTCATAACAAGT

Gene: Bcep18194_A5286: Putative alkanesulfonate metabolism utilization regulator, GntR family
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
Putative alkanesulfonate metabolism utilization regulator, GntR family
PA2298
 
Burkholderia cepacia AMMD

Gene: Bamb_1960: Putative reductase (alkanesulfonate metabolism)
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
 
Burkholderia sp. 383

Gene: Bcep18194_A5287: Putative reductase (alkanesulfonate metabolism)
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
Putative reductase (alkanesulfonate metabolism)
PA2297
 
Burkholderia cepacia AMMD

Gene: Bamb_1961: Probable ferredoxin
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
 
Burkholderia sp. 383

Gene: Bcep18194_A5288: Probable ferredoxin
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
Probable ferredoxin
PA2293
 
Burkholderia cepacia AMMD

Gene: Bamb_1962: FOG: HEAT repeat
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
 
Burkholderia sp. 383

Gene: Bcep18194_A5289: FOG: HEAT repeat
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
FOG: HEAT repeat
PA2292
 
Burkholderia cepacia AMMD

Gene: Bamb_1963: hypothetical protein
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
 
Burkholderia sp. 383

Gene: Bcep18194_A5290: hypothetical protein
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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