Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Bxe_A4089 - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia pseudomallei K96243
Burkholderia mallei ATCC 23344
Burkholderia cepacia AMMD
Burkholderia sp. 383
Burkholderia vietnamiensis G4
Burkholderia glumae BGR1
Burkholderia phymatum STM815
Burkholderia xenovorans LB400 13 4
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Bxe_A4090
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
*
Burkholderia xenovorans LB400

Site:
position = -47
score = 5.26191
sequence = AGTGTCGACACT

Gene: Bxe_A4090: Major facilitator superfamily (MFS) metabolite(sugar)/H symporter
Major facilitator superfamily (MFS) metabolite(sugar)/H symporter
Bxe_A4091
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4091: Immune-responsive protein 1
Immune-responsive protein 1
Bxe_A4092
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4092: hypothetical protein
hypothetical protein
Bxe_A4093
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383

Gene: Bcep18194_C7347: protein of unknown function DUF336
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4093: protein of unknown function DUF336
protein of unknown function DUF336
Bxe_A4094
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4094: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
Bxe_A4095
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4095: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
Bxe_A4096
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4096: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c
 
CRON 2.
Bxe_A4101
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
*
Burkholderia xenovorans LB400

Site:
position = -230
score = 5.26977
sequence = TTTGTCGACAAT

Site:
position = -128
score = 5.64741
sequence = ATTGTCGACAAT

Site:
position = -67
score = 5.26977
sequence = GTTGTCGACAAT

Gene: Bxe_A4101: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
Bxe_A4102
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4102: Immune-responsive protein 1
Immune-responsive protein 1
 
CRON 3.
Bxe_A4089
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
*
Burkholderia xenovorans LB400

Site:
position = -186
score = 5.26191
sequence = AGTGTCGACACT

Gene: Bxe_A4089: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
 
CRON 4.
Bxe_A4100
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
*
Burkholderia xenovorans LB400

Site:
position = -166
score = 5.64741
sequence = ATTGTCGACAAT

Site:
position = -64
score = 5.26977
sequence = ATTGTCGACAAA

Site:
position = -227
score = 5.26977
sequence = ATTGTCGACAAC

Gene: Bxe_A4100: Major facilitator superfamily (MFS) metabolite/H+ symporter
Major facilitator superfamily (MFS) metabolite/H+ symporter
Bxe_A4099
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4099: Probable glucarate transporter
Probable glucarate transporter
Bxe_A4098
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia cepacia AMMD
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia phymatum STM815
 
Burkholderia xenovorans LB400

Gene: Bxe_A4098: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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