Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog H16_B1761 - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis
Ralstonia eutropha H16 5 2
Ralstonia eutropha JMP134 5 2
Ralstonia metallidurans CH34
Ralstonia pickettii 12J
Ralstonia solanacearum GMI1000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
H16_B1761
 
Cupriavidus taiwanensis
*
Ralstonia eutropha H16

Site:
position = -159
score = 4.60595
sequence = TATTGTTGAACAATA

Site:
position = -73
score = 4.1708
sequence = TATTGTTCAACAAAG

Gene: H16_B1761: Transcriptional regulator, GntR family
*
Ralstonia eutropha JMP134

Site:
position = -189
score = 5.21043
sequence = TATTGTTGAACAATC

Gene: Reut_A2447: Transcriptional regulator, GntR family
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Transcriptional regulator, GntR family
 
CRON 2.
COG2814
 
Cupriavidus taiwanensis
*
Ralstonia eutropha H16

Site:
position = -191
score = 4.60595
sequence = TATTGTTCAACAATA

Gene: H16_B1760: Major facilitator family transporter
*
Ralstonia eutropha JMP134

Site:
position = -198
score = 5.21043
sequence = GATTGTTCAACAATA

Gene: Reut_A2448: Major facilitator family transporter
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Major facilitator family transporter
COG4336
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1759: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
 
Ralstonia eutropha JMP134

Gene: Reut_A2449: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
alhAB
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1758: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)
 
Ralstonia eutropha JMP134

Gene: Reut_A2450: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)
alhC
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1757: Urea carboxylase (EC 6.3.4.6)
 
Ralstonia eutropha JMP134

Gene: Reut_A2451: Urea carboxylase (EC 6.3.4.6)
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Urea carboxylase (EC 6.3.4.6)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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