Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SCO1410 - Streptomycetaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptomyces avermitilis MA-4680 4 2
Streptomyces coelicolor A3(2) 10 4
Streptomyces griseus subsp. griseus NBRC 13350
Streptomyces scabiei 87.22 6 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
SCF51A.18c
 
Streptomyces avermitilis MA-4680
*
Streptomyces coelicolor A3(2)

Site:
position = -131
score = 5.73459
sequence = GATCGTTCAACGATC

Site:
position = -251
score = 5.73459
sequence = GATCGTTGAACGATC

Gene: SCO0440: FIG015373: Membrane protein
 
Streptomyces griseus subsp. griseus NBRC 13350
 
Streptomyces scabiei 87.22
FIG015373: Membrane protein
SCF51A.17c
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)

Gene: SCO0439: FIG001614: Membrane protein
 
Streptomyces griseus subsp. griseus NBRC 13350
 
Streptomyces scabiei 87.22
FIG001614: Membrane protein
pcp
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)

Gene: SCO0438: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
 
Streptomyces griseus subsp. griseus NBRC 13350
 
Streptomyces scabiei 87.22
Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
SCF51A.15c
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)

Gene: SCO0437: conserved hypothetical protein SCF51A.15c
 
Streptomyces griseus subsp. griseus NBRC 13350
 
Streptomyces scabiei 87.22
conserved hypothetical protein SCF51A.15c
 
CRON 2.
SCO1410
*
Streptomyces avermitilis MA-4680

Site:
position = -65
score = 5.73459
sequence = GATCGTTGAACGATC

Gene: SAV_6942: Transcriptional regulator, GntR family
*
Streptomyces coelicolor A3(2)

Site:
position = -65
score = 5.73459
sequence = GATCGTTCAACGATC

Gene: SCO1410: Transcriptional regulator, GntR family
 
Streptomyces griseus subsp. griseus NBRC 13350
*
Streptomyces scabiei 87.22

Site:
position = -64
score = 5.73459
sequence = GATCGTTGAACGATC

Gene: SCAB_76011: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
 
CRON 3.
COG2814
*
Streptomyces avermitilis MA-4680

Site:
position = -205
score = 5.73459
sequence = GATCGTTCAACGATC

Gene: SAV_6941: Major facilitator superfamily transporter
*
Streptomyces coelicolor A3(2)

Site:
position = -87
score = 5.73459
sequence = GATCGTTGAACGATC

Gene: SCO1411: Major facilitator superfamily transporter
 
Streptomyces griseus subsp. griseus NBRC 13350
*
Streptomyces scabiei 87.22

Site:
position = -126
score = 5.73459
sequence = GATCGTTCAACGATC

Gene: SCAB_76001: Major facilitator superfamily transporter
Major facilitator superfamily transporter
COG4336
 
Streptomyces avermitilis MA-4680

Gene: SAV_6940: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
 
Streptomyces coelicolor A3(2)

Gene: SCO1412: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
 
Streptomyces griseus subsp. griseus NBRC 13350
 
Streptomyces scabiei 87.22

Gene: SCAB_75991: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
COG1540
 
Streptomyces avermitilis MA-4680

Gene: SAV_6939: Uncharacterized proteins, homologs of lactam utilization protein B
*
Streptomyces coelicolor A3(2)

Site:
position = -150
score = 5.73459
sequence = GATCGTTGAACGATC

Site:
position = -30
score = 5.73459
sequence = GATCGTTCAACGATC

Gene: SCO0441: Uncharacterized proteins, homologs of lactam utilization protein B
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_3193: Uncharacterized proteins, homologs of lactam utilization protein B
 
Streptomyces scabiei 87.22

Gene: SCAB_75981: Uncharacterized proteins, homologs of lactam utilization protein B
Uncharacterized proteins, homologs of lactam utilization protein B
alhA
 
Streptomyces avermitilis MA-4680

Gene: SAV_6938: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
 
Streptomyces coelicolor A3(2)

Gene: SCO0442: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_3192: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
 
Streptomyces scabiei 87.22

Gene: SCAB_75971: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
alhB
 
Streptomyces avermitilis MA-4680

Gene: SAV_6937: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54)
 
Streptomyces coelicolor A3(2)

Gene: SCO0443: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_3191: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54)
 
Streptomyces scabiei 87.22

Gene: SCAB_75961: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54)
Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD