Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PhnF - Streptomycetaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Phosphonate utilization; 2-aminoethylphosphonate utilization
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptomyces avermitilis MA-4680
Streptomyces coelicolor A3(2)
Streptomyces griseus subsp. griseus NBRC 13350 6 1
Streptomyces scabiei 87.22
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG0665
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -80
score = 3.76814
sequence = ACGGGTCTGGTCCAAA

Gene: SGR_4692: Putative FAD dependent oxidoreductase
 
Streptomyces scabiei 87.22
Putative FAD dependent oxidoreductase
phnX
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_4693: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
 
Streptomyces scabiei 87.22
Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
phnT
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_4694: Probable 2-aminoethylphosphonate ABC transporter, ATP-binding protein
 
Streptomyces scabiei 87.22
Probable 2-aminoethylphosphonate ABC transporter, ATP-binding protein
phnU
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_4695: Probable 2-aminoethylphosphonate ABC transporter, permease protein 1
 
Streptomyces scabiei 87.22
Probable 2-aminoethylphosphonate ABC transporter, permease protein 1
phnV
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_4696: 2-aminoethylphosphonate ABC transporter permease protein II (TC 3.A.1.9.1)
 
Streptomyces scabiei 87.22
Probable 2-aminoethylphosphonate ABC transporter, permease protein 2
phnT
 
Streptomyces avermitilis MA-4680
 
Streptomyces coelicolor A3(2)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_4697: Probable 2-aminoethylphosphonate ABC transporter, permease protein 2
 
Streptomyces scabiei 87.22
Probable 2-aminoethylphosphonate ABC transporter, permease protein 2
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD