Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LldR - Mycobacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Lactate utilization
Effector: L-lactate
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium abscessus ATCC 19977
Mycobacterium avium 104
Mycobacterium flavescens PYR-GCK
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium smegmatis str. MC2 155 4 2
Mycobacterium sp. JLS 4 2
Mycobacterium tuberculosis H37Rv
Mycobacterium vanbaalenii PYR-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lldR
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -42
score = 6.19742
sequence = TGTGGTCAGACCACA

Site:
position = -76
score = 6.19742
sequence = TGTGGTCTGACCACA

Gene: MSMEG_0596: Lactate-responsive regulator LldR in Actinobacteria, GntR family
*
Mycobacterium sp. JLS

Site:
position = -23
score = 6.19742
sequence = TGTGGTCTGACCACA

Site:
position = 1
score = 6.005
sequence = TGTGGTCGGACCACA

Gene: Mjls_4765: Lactate-responsive regulator LldR in Actinobacteria, GntR family
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1
Lactate-responsive regulator LldR in Actinobacteria, GntR family
 
CRON 2.
lldE
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3704: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -62
score = 6.19742
sequence = TGTGGTCTGACCACA

Site:
position = -28
score = 6.19742
sequence = TGTGGTCAGACCACA

Gene: MSMEG_0595: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
*
Mycobacterium sp. JLS

Site:
position = -36
score = 6.19742
sequence = TGTGGTCAGACCACA

Site:
position = -60
score = 6.005
sequence = TGTGGTCCGACCACA

Gene: Mjls_4766: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2709: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE
lldF
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3703: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_0594: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Mycobacterium sp. JLS

Gene: Mjls_4767: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2710: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF
lldG
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3702: L-lactate dehydrogenase, subunit LldG
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_0593: L-lactate dehydrogenase, subunit LldG
 
Mycobacterium sp. JLS

Gene: Mjls_4768: L-lactate dehydrogenase, subunit LldG
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2711: L-lactate dehydrogenase, subunit LldG
L-lactate dehydrogenase, subunit LldG
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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