Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog MetR - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process: Methionine biosynthesis
Effector: Homocysteine
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Ralstonia solanacearum GMI1000 2 2
Ralstonia pickettii 12J 2 2
Ralstonia metallidurans CH34 2 2
Ralstonia eutropha JMP134 2 2
Ralstonia eutropha H16 2 2
Cupriavidus taiwanensis 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
metE
*
Ralstonia solanacearum GMI1000

Site:
position = -94
score = 5.52566
sequence = TATGAATTCAATTCAAC

Gene: RSp0676: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Ralstonia pickettii 12J

Site:
position = -105
score = 5.8919
sequence = TATGAATTGAATTCAAA

Gene: Rpic_4542: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Ralstonia metallidurans CH34

Site:
position = -102
score = 5.39559
sequence = TATGAATTTCATTCACT

Gene: Rmet_4564: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Ralstonia eutropha JMP134

Site:
position = -66
score = 5.92477
sequence = TATGAAATTCATTCATA

Gene: Reut_B4245: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Ralstonia eutropha H16

Site:
position = -96
score = 5.71952
sequence = TATGAAACTCATTCATA

Gene: H16_B1581: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Cupriavidus taiwanensis

Site:
position = -96
score = 5.86106
sequence = TATGAAATTGATTCATA

Gene: RALTA_B1420: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
CRON 2.
metR
*
Ralstonia solanacearum GMI1000

Site:
position = -38
score = 5.52566
sequence = GTTGAATTGAATTCATA

Gene: RSp0677: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Ralstonia pickettii 12J

Site:
position = -32
score = 5.8919
sequence = TTTGAATTCAATTCATA

Gene: Rpic_4541: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Ralstonia metallidurans CH34

Site:
position = -36
score = 5.39559
sequence = AGTGAATGAAATTCATA

Gene: Rmet_4563: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Ralstonia eutropha JMP134

Site:
position = -54
score = 5.92477
sequence = TATGAATGAATTTCATA

Gene: Reut_B4244: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Ralstonia eutropha H16

Site:
position = -51
score = 5.71952
sequence = TATGAATGAGTTTCATA

Gene: H16_B1580: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Cupriavidus taiwanensis

Site:
position = -51
score = 5.86106
sequence = TATGAATCAATTTCATA

Gene: RALTA_B1419: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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