Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cg2544 - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process:
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46
Corynebacterium aurimucosum ATCC 700975
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314 8 2
Corynebacterium glutamicum ATCC 13032 4 2
Corynebacterium jeikeium K411
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
cg2543
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -89
score = 6.04555
sequence = GACTAACATGTTACTG

Gene: CE2222: Putative oxidoreductase
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -54
score = 6.04555
sequence = CGGTAACATGTTACTC

Gene: cg2543: Putative oxidoreductase
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Putative oxidoreductase
cg2542
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE2221: Putative permease
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2542: Putative permease
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Putative permease
cg2541
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE2220: Conserved hypothetical protein
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2540: Conserved hypothetical protein
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Conserved hypothetical protein
 
CRON 2.
cg2544
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = 56
score = 6.04555
sequence = CAGTAACATGTTAGTC

Gene: CE2223: Predicted transcriptional regulator, GntR family
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -40
score = 6.04555
sequence = GAGTAACATGTTACCG

Gene: cg2544: Predicted transcriptional regulator, GntR family
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Predicted transcriptional regulator, GntR family
cg2549
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1826: Predicted ABC transporter, substrate-binding protein
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1740: Predicted ABC transporter, substrate-binding protein
 
Corynebacterium efficiens YS-314

Gene: CE2224: Predicted ABC transporter, substrate-binding protein
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2549: Predicted ABC transporter, substrate-binding protein
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1334: Predicted ABC transporter, substrate-binding protein
 
Corynebacterium urealyticum DSM 7109
Predicted ABC transporter, substrate-binding protein
cg2550
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1827: Predicted ABC transporter, permease protein 1
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1741: Predicted ABC transporter, permease protein 1
 
Corynebacterium efficiens YS-314

Gene: CE2225: Predicted ABC transporter, permease protein 1
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2550: Predicted ABC transporter, permease protein 1
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1335: Predicted ABC transporter, permease protein 1
 
Corynebacterium urealyticum DSM 7109
Predicted ABC transporter, permease protein 1
cg2551
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1828: Predicted ABC transporter, permease protein 2
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1742: Predicted ABC transporter, permease protein 2
 
Corynebacterium efficiens YS-314

Gene: CE2226: Predicted ABC transporter, permease protein 2
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2551: Predicted ABC transporter, permease protein 2
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Predicted ABC transporter, permease protein 2
cg2552
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1829: Predicted ABC transporter, ATP-binding protein
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1743: Predicted ABC transporter, ATP-binding protein
 
Corynebacterium efficiens YS-314

Gene: CE2227: Predicted ABC transporter, ATP-binding protein
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2552: Predicted ABC transporter, ATP-binding protein
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1336: Predicted ABC transporter, ATP-binding protein
 
Corynebacterium urealyticum DSM 7109
Predicted ABC transporter, ATP-binding protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD