Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog MetR - Shewanellaceae

Properties
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Methionine biosynthesis
Effector: Homocysteine
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 117 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Shewanella oneidensis MR-1 7 6
Shewanella putrefaciens CN-32 7 6
Shewanella sp W3-18-1 7 6
Shewanella sp ANA-3 7 6
Shewanella sp MR-4 7 6
Shewanella sp MR-7 7 6
Shewanella baltica OS155 7 6
Shewanella denitrificans OS217 6 5
Shewanella frigidimarina NCIMB 400 4 3
Shewanella amazonensis SB2B 5 4
Shewanella loihica PV-4 6 5
Shewanella pealeana ATCC 700345 5 4
Shewanella halifaxensis HAW-EB4 4 3
Shewanella piezotolerans WP3 4 3
Shewanella sediminis HAW-EB3 5 4
Shewanella woodyi ATCC 51908 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ilvI
*
Shewanella oneidensis MR-1

Site:
position = -203
score = 3.93567
sequence = TTGAAATGTGTTCTT

Site:
position = -243
score = 4.54669
sequence = ATGAAATTGTCTCAA

Gene: SO2279: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella putrefaciens CN-32

Site:
position = -243
score = 4.38581
sequence = TTGAAAATGTTTCAA

Gene: Sputcn32_2138: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella sp W3-18-1

Site:
position = -243
score = 4.38581
sequence = TTGAAAATGTTTCAA

Gene: Sputw3181_1873: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella sp ANA-3

Site:
position = -203
score = 3.93567
sequence = TTGAAATGTGTTCTT

Site:
position = -243
score = 4.69933
sequence = ATGAAATTGTTTCAA

Gene: Shewana3_2269: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella sp MR-4

Site:
position = -204
score = 4.04276
sequence = TTGAAATGTATTCTT

Site:
position = -244
score = 4.69933
sequence = ATGAAATTGTTTCAA

Gene: Shewmr4_1750: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella sp MR-7

Site:
position = -203
score = 3.93567
sequence = TTGAAATGTGTTCTT

Site:
position = -243
score = 4.69933
sequence = ATGAAATTGTTTCAA

Gene: Shewmr7_1830: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella baltica OS155

Site:
position = -120
score = 4.05249
sequence = ACGAAGTCAGTTCAG

Site:
position = -245
score = 4.47247
sequence = GTGAAATTGTTTCAA

Gene: Sbal_2386: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella denitrificans OS217

Site:
position = -91
score = 4.2499
sequence = TTGAAGTACCTTCAA

Site:
position = -245
score = 4.4646
sequence = ATGAATTTTACTCAC

Gene: Sden_2122: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -236
score = 4.87153
sequence = ATGAAATGATTTCAA

Gene: Sfri_1628: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella amazonensis SB2B

Site:
position = -245
score = 3.72663
sequence = TTGAATTTTCTTTAA

Site:
position = -341
score = 3.37922
sequence = CTGAAAGCGATTTAT

Gene: Sama_2018: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella loihica PV-4

Site:
position = -221
score = 4.15863
sequence = GTGAGTTTTGCTCAA

Gene: Shew_1776: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella pealeana ATCC 700345

Site:
position = -243
score = 4.59679
sequence = ATGAATTTTCTTCAT

Gene: Spea_1911: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -244
score = 4.32237
sequence = ATGAATGTTCTTCAT

Gene: Shal_2387: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella piezotolerans WP3

Site:
position = -242
score = 4.23057
sequence = TTGAAAATTCTTCAT

Gene: swp_2842: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Shewanella sediminis HAW-EB3

Site:
position = -247
score = 4.56454
sequence = GTGAATTTTTTTCAT

Gene: Ssed_2666: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_1955: Acetolactate synthase large subunit (EC 2.2.1.6)
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvH
 
Shewanella oneidensis MR-1

Gene: SO2278: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_2139: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella sp W3-18-1

Gene: Sputw3181_1872: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella sp ANA-3

Gene: Shewana3_2270: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella sp MR-4

Gene: Shewmr4_1749: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella sp MR-7

Gene: Shewmr7_1829: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella baltica OS155

Gene: Sbal_2387: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella denitrificans OS217

Gene: Sden_2123: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_1627: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella amazonensis SB2B

Gene: Sama_2019: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella loihica PV-4

Gene: Shew_1775: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella pealeana ATCC 700345

Gene: Spea_1910: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_2388: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella piezotolerans WP3

Gene: swp_2843: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_2667: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_1954: Acetolactate synthase small subunit (EC 2.2.1.6)
Acetolactate synthase small subunit (EC 2.2.1.6)
 
CRON 2.
metC
*
Shewanella oneidensis MR-1

Site:
position = -110
score = 4.25215
sequence = TTGAGGCAAACTCAT

Gene: SO2191: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella putrefaciens CN-32

Site:
position = -141
score = 4.43859
sequence = ATGAGCCAAACTCAT

Gene: Sputcn32_1736: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella sp W3-18-1

Site:
position = -141
score = 4.43859
sequence = ATGAGCCAAACTCAT

Gene: Sputw3181_2289: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella sp ANA-3

Site:
position = -109
score = 4.25215
sequence = TTGAGGCAAACTCAT

Gene: Shewana3_2414: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella sp MR-4

Site:
position = -109
score = 4.25215
sequence = TTGAGGCAAACTCAT

Gene: Shewmr4_2204: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella sp MR-7

Site:
position = -109
score = 4.25215
sequence = TTGAGGCAAACTCAT

Gene: Shewmr7_2281: Cystathionine beta-lyase (EC 4.4.1.8)
*
Shewanella baltica OS155

Site:
position = -148
score = 4.54568
sequence = ATGAGTCAAACTCAT

Gene: Sbal_1838: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella denitrificans OS217

Gene: Sden_2313: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_1621: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella amazonensis SB2B

Gene: Sama_2008: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella loihica PV-4

Gene: Shew_1789: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella pealeana ATCC 700345

Gene: Spea_2520: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_1732: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella piezotolerans WP3

Gene: swp_3096: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_2496: Cystathionine beta-lyase (EC 4.4.1.8)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_2120: Cystathionine beta-lyase (EC 4.4.1.8)
Cystathionine beta-lyase (EC 4.4.1.8)
 
CRON 3.
metE
*
Shewanella oneidensis MR-1

Site:
position = -166
score = 4.30796
sequence = TTGAAATCAATTCGG

Site:
position = -188
score = 4.35037
sequence = GTGAATTTCGCTCAT

Gene: SO0818: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella putrefaciens CN-32

Site:
position = -189
score = 4.35037
sequence = GTGAATTTCGCTCAT

Site:
position = -167
score = 4.30796
sequence = TTGAAATCAATTCGG

Gene: Sputcn32_3172: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sp W3-18-1

Site:
position = -189
score = 4.45747
sequence = GTGAATTTCACTCAT

Site:
position = -167
score = 4.30796
sequence = TTGAAATCAATTCGG

Gene: Sputw3181_0771: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sp ANA-3

Site:
position = -189
score = 4.35037
sequence = GTGAATTTCGCTCAT

Site:
position = -167
score = 4.30796
sequence = TTGAAATCAATTCGG

Gene: Shewana3_3469: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sp MR-4

Site:
position = -166
score = 4.30796
sequence = TTGAAATCAATTCGG

Site:
position = -188
score = 4.35037
sequence = GTGAATTTCGCTCAT

Gene: Shewmr4_3299: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella sp MR-7

Site:
position = -189
score = 4.35037
sequence = GTGAATTTCGCTCAT

Site:
position = -167
score = 4.30796
sequence = TTGAAATCAATTCGG

Gene: Shewmr7_0654: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella baltica OS155

Site:
position = -167
score = 4.30796
sequence = TTGAAATCAATTCGG

Site:
position = -189
score = 4.29767
sequence = GTGAAATTCGCTCAT

Gene: Sbal_0667: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella denitrificans OS217

Site:
position = -146
score = 4.53168
sequence = ATGAGTTTCACTCAT

Site:
position = -124
score = 4.0853
sequence = CTGAATTTATTTCCA

Gene: Sden_0732: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Shewanella frigidimarina NCIMB 400
*
Shewanella amazonensis SB2B

Site:
position = -153
score = 4.4897
sequence = ATGAAGTTTGTTCAT

Site:
position = -131
score = 4.08435
sequence = GTGAACACAATTCGT

Gene: Sama_2627: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella loihica PV-4

Site:
position = -167
score = 4.3598
sequence = GTGAAATCAATTCGA

Site:
position = -189
score = 4.59123
sequence = ATGAATTTGGCTCAT

Gene: Shew_2986: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Shewanella pealeana ATCC 700345

Site:
position = -166
score = 4.52452
sequence = ATGAAATTCGCTCAT

Site:
position = -144
score = 4.28
sequence = TTGAATTCGTTTCGA

Gene: Spea_3202: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Shewanella halifaxensis HAW-EB4
 
Shewanella piezotolerans WP3
*
Shewanella sediminis HAW-EB3

Site:
position = -191
score = 4.737
sequence = ATGAATTTTGTTCAT

Site:
position = -169
score = 4.58665
sequence = TTGAAATCAATTCGT

Gene: Ssed_3555: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Shewanella woodyi ATCC 51908
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
CRON 4.
luxS
*
Shewanella oneidensis MR-1

Site:
position = -120
score = 4.76511
sequence = ATGAGATGATTTCAT

Gene: SO1101: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
*
Shewanella putrefaciens CN-32

Site:
position = -278
score = 4.48645
sequence = TTGAGAGAATTTCAA

Gene: Sputcn32_0938: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
*
Shewanella sp W3-18-1

Site:
position = -278
score = 4.48645
sequence = TTGAGAGAATTTCAA

Gene: Sputw3181_3238: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
*
Shewanella sp ANA-3

Site:
position = -111
score = 4.53826
sequence = GTGAGATGATTTCAT

Gene: Shewana3_0936: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
*
Shewanella sp MR-4

Site:
position = -111
score = 4.76511
sequence = ATGAGATGATTTCAT

Gene: Shewmr4_0934: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
*
Shewanella sp MR-7

Site:
position = -111
score = 4.76511
sequence = ATGAGATGATTTCAT

Gene: Shewmr7_0972: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
*
Shewanella baltica OS155

Site:
position = -121
score = 4.76511
sequence = ATGAGATGATTTCAT

Gene: Sbal_0922: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
*
Shewanella denitrificans OS217

Site:
position = -101
score = 4.65694
sequence = TTGAAATCTATTCAT

Gene: Sden_0981: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_0947: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
 
Shewanella amazonensis SB2B

Gene: Sama_2541: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
*
Shewanella loihica PV-4

Site:
position = -153
score = 4.47147
sequence = TTGAGCTAAGTTCAC

Gene: Shew_2882: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
 
Shewanella pealeana ATCC 700345

Gene: Spea_3104: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_3188: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
 
Shewanella piezotolerans WP3

Gene: swp_1166: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
 
Shewanella sediminis HAW-EB3

Gene: Ssed_3432: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
 
Shewanella woodyi ATCC 51908

Gene: Swoo_3618: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
 
CRON 5.
mdeA
 
Shewanella oneidensis MR-1

Gene: SO1812: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella putrefaciens CN-32

Gene: Sputcn32_1507: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella sp W3-18-1

Gene: Sputw3181_2594: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella sp ANA-3

Gene: Shewana3_2643: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella sp MR-4

Gene: Shewmr4_2477: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella sp MR-7

Gene: Shewmr7_2545: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella baltica OS155

Gene: Sbal_1622: Methionine gamma-lyase (EC 4.4.1.11)
*
Shewanella denitrificans OS217

Site:
position = -67
score = 5.05868
sequence = ATGAAATTAATTCAT

Gene: Sden_2521: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella frigidimarina NCIMB 400

Gene: Sfri_1369: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella amazonensis SB2B

Gene: Sama_1242: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella loihica PV-4

Gene: Shew_2491: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella pealeana ATCC 700345

Gene: Spea_2664: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella halifaxensis HAW-EB4

Gene: Shal_2751: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella piezotolerans WP3

Gene: swp_3243: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella sediminis HAW-EB3

Gene: Ssed_1559: Methionine gamma-lyase (EC 4.4.1.11)
 
Shewanella woodyi ATCC 51908

Gene: Swoo_3095: Methionine gamma-lyase (EC 4.4.1.11)
Methionine gamma-lyase (EC 4.4.1.11)
 
CRON 6.
glyA
*
Shewanella oneidensis MR-1

Site:
position = -120
score = 4.25634
sequence = TTGAGGTGCATTCAA

Gene: SO3471: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella putrefaciens CN-32

Site:
position = -120
score = 4.4379
sequence = ATGAGCCAAGTTCAA

Gene: Sputcn32_2780: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella sp W3-18-1

Site:
position = -120
score = 4.4379
sequence = ATGAGCCAAGTTCAA

Gene: Sputw3181_1232: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella sp ANA-3

Site:
position = -120
score = 4.16325
sequence = TTGAGGCGAGTTCAA

Gene: Shewana3_1094: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella sp MR-4

Site:
position = -120
score = 4.16325
sequence = TTGAGGCGAGTTCAA

Gene: Shewmr4_1094: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella sp MR-7

Site:
position = -120
score = 4.16325
sequence = TTGAGGCGAGTTCAA

Gene: Shewmr7_1160: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella baltica OS155

Site:
position = -120
score = 4.4379
sequence = ATGAGCCAAGTTCAA

Gene: Sbal_3162: Serine hydroxymethyltransferase (EC 2.1.2.1)
 
Shewanella denitrificans OS217

Gene: Sden_1142: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella frigidimarina NCIMB 400

Site:
position = -212
score = 3.7102
sequence = ATGTGCTGAACTCAA

Gene: Sfri_1033: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella amazonensis SB2B

Site:
position = -120
score = 3.73724
sequence = ATGAAACACAGTCAT

Gene: Sama_1014: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella loihica PV-4

Site:
position = -122
score = 3.98567
sequence = ATGAACATTTCTCAG

Gene: Shew_1185: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella pealeana ATCC 700345

Site:
position = -119
score = 4.03362
sequence = ACGAAACTCACTCAT

Gene: Spea_1160: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella halifaxensis HAW-EB4

Site:
position = -119
score = 3.98091
sequence = ACGAAACTCTCTCAT

Gene: Shal_1203: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella piezotolerans WP3

Site:
position = -119
score = 4.0284
sequence = ATAAGTTTAACTCAT

Gene: swp_1337: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella sediminis HAW-EB3

Site:
position = -218
score = 4.41611
sequence = TTGAATTGTCTTCAA

Site:
position = -199
score = 4.05321
sequence = ATGAGTTTCCTTCGA

Gene: Ssed_1271: Serine hydroxymethyltransferase (EC 2.1.2.1)
*
Shewanella woodyi ATCC 51908

Site:
position = -119
score = 4.09708
sequence = GTGAGTCATGTTCAT

Gene: Swoo_1380: Serine hydroxymethyltransferase (EC 2.1.2.1)
Serine hydroxymethyltransferase (EC 2.1.2.1)
 
CRON 7.
metR
*
Shewanella oneidensis MR-1

Site:
position = -48
score = 4.30796
sequence = CCGAATTGATTTCAA

Site:
position = -26
score = 4.35037
sequence = ATGAGCGAAATTCAC

Gene: SO0817: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella putrefaciens CN-32

Site:
position = -48
score = 4.30796
sequence = CCGAATTGATTTCAA

Site:
position = -26
score = 4.35037
sequence = ATGAGCGAAATTCAC

Gene: Sputcn32_3173: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sp W3-18-1

Site:
position = -48
score = 4.30796
sequence = CCGAATTGATTTCAA

Site:
position = -26
score = 4.45747
sequence = ATGAGTGAAATTCAC

Gene: Sputw3181_0770: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sp ANA-3

Site:
position = -48
score = 4.30796
sequence = CCGAATTGATTTCAA

Site:
position = -26
score = 4.35037
sequence = ATGAGCGAAATTCAC

Gene: Shewana3_3470: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sp MR-4

Site:
position = -48
score = 4.30796
sequence = CCGAATTGATTTCAA

Site:
position = -26
score = 4.35037
sequence = ATGAGCGAAATTCAC

Gene: Shewmr4_3300: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sp MR-7

Site:
position = -26
score = 4.35037
sequence = ATGAGCGAAATTCAC

Site:
position = -48
score = 4.30796
sequence = CCGAATTGATTTCAA

Gene: Shewmr7_0653: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella baltica OS155

Site:
position = -48
score = 4.30796
sequence = CCGAATTGATTTCAA

Site:
position = -26
score = 4.29767
sequence = ATGAGCGAATTTCAC

Gene: Sbal_0666: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella denitrificans OS217

Site:
position = -48
score = 4.0853
sequence = TGGAAATAAATTCAG

Site:
position = -26
score = 4.53168
sequence = ATGAGTGAAACTCAT

Gene: Sden_0731: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella frigidimarina NCIMB 400

Site:
position = -48
score = 4.58665
sequence = TCGAATTGATTTCAT

Site:
position = -26
score = 4.27771
sequence = TTGAGCAAGATTCAT

Gene: Sfri_0826: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella amazonensis SB2B

Site:
position = -141
score = 4.3972
sequence = ATGAGCACATTTCAA

Site:
position = -48
score = 4.08435
sequence = ACGAATTGTGTTCAC

Site:
position = -26
score = 4.4897
sequence = ATGAACAAACTTCAT

Gene: Sama_2628: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella loihica PV-4

Site:
position = -26
score = 4.59123
sequence = ATGAGCCAAATTCAT

Site:
position = -48
score = 4.3598
sequence = TCGAATTGATTTCAC

Site:
position = -178
score = 4.63162
sequence = ATGAGAGAAATTCAT

Gene: Shew_2987: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella pealeana ATCC 700345

Site:
position = -154
score = 4.16546
sequence = ATGAGGAAAATTCAG

Site:
position = -48
score = 4.28
sequence = TCGAAACGAATTCAA

Site:
position = -26
score = 4.52452
sequence = ATGAGCGAATTTCAT

Gene: Spea_3203: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella halifaxensis HAW-EB4

Site:
position = -162
score = 4.30566
sequence = ATGAGCAAAATTCAG

Site:
position = -48
score = 4.28
sequence = TCGAAACGAATTCAA

Gene: Shal_3283: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella piezotolerans WP3

Site:
position = -26
score = 4.39145
sequence = ATGAGAAAACTTCAT

Site:
position = -48
score = 4.26383
sequence = TAGAAATGAATTCAA

Site:
position = -153
score = 4.5654
sequence = ATGAATAAAATTCAG

Gene: swp_1138: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella sediminis HAW-EB3

Site:
position = -190
score = 3.99059
sequence = GTGAGCAGAATTCAG

Site:
position = -59
score = 4.58665
sequence = ACGAATTGATTTCAA

Site:
position = -37
score = 4.737
sequence = ATGAACAAAATTCAT

Gene: Ssed_3556: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
*
Shewanella woodyi ATCC 51908

Site:
position = -59
score = 3.78163
sequence = GGGAATAGATTTCAA

Site:
position = -192
score = 4.30566
sequence = ATGAGCAAAATTCAG

Site:
position = -37
score = 4.53168
sequence = ATGAGTGAAACTCAT

Gene: Swoo_3732: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD