Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cg1143 - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46 3 2
Corynebacterium aurimucosum ATCC 700975 6 2
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314 5 2
Corynebacterium glutamicum ATCC 13032 6 3
Corynebacterium jeikeium K411 6 2
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109 6 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG1914
*
Corynebacterium amycolatum SK46

Site:
position = -91
score = 6.31363
sequence = ACATTGTTCAACAATCT

Gene: CORAM0001_0544: Mn2+ and Fe2+ transporters of the NRAMP family
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -69
score = 5.87607
sequence = AGATTGTTCAACAACCC

Gene: cauri_0587: Mn2+ and Fe2+ transporters of the NRAMP family
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -34
score = 6.19719
sequence = ACATTGTTGAACAATCC

Gene: CE1067: Mn2+ and Fe2+ transporters of the NRAMP family
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -76
score = 6.44244
sequence = AGATTGTTCAACAATCT

Gene: cg1142: Mn2+ and Fe2+ transporters of the NRAMP family
*
Corynebacterium jeikeium K411

Site:
position = -55
score = 5.50048
sequence = GGATTGTTGAACAACAT

Gene: jk0402: Mn2+ and Fe2+ transporters of the NRAMP family
 
Corynebacterium kroppenstedtii DSM 44385
*
Corynebacterium urealyticum DSM 7109

Site:
position = -55
score = 4.90057
sequence = TCTTCGTTGAACAATCC

Gene: cur_1582: Mn2+ and Fe2+ transporters of the NRAMP family
Mn2+ and Fe2+ transporters of the NRAMP family
COG1540
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_0545: Uncharacterized proteins, homologs of lactam utilization protein B
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -46
score = 6.0336
sequence = AGATTGTTCAACAATTC

Gene: cauri_0592: Uncharacterized proteins, homologs of lactam utilization protein B
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE1066: Uncharacterized proteins, homologs of lactam utilization protein B
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1141: Uncharacterized proteins, homologs of lactam utilization protein B
*
Corynebacterium jeikeium K411

Site:
position = -68
score = 6.19719
sequence = ACATTGTTGAACAATCC

Gene: jk0407: Uncharacterized proteins, homologs of lactam utilization protein B
 
Corynebacterium kroppenstedtii DSM 44385
*
Corynebacterium urealyticum DSM 7109

Site:
position = -35
score = 5.1996
sequence = GTACTGTTCAACAATTT

Gene: cur_1577: Uncharacterized proteins, homologs of lactam utilization protein B
Uncharacterized proteins, homologs of lactam utilization protein B
alhA
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0591: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE1065: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1140: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
 
Corynebacterium jeikeium K411

Gene: jk0406: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1578: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)
Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
alhB
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE1064: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg1139: Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54)
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109
Putative allophanate hydrolase 2, subunit 2 (EC 3.5.1.54)
alhC
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0590: Urea carboxylase (EC 6.3.4.6)
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314
 
Corynebacterium glutamicum ATCC 13032
 
Corynebacterium jeikeium K411

Gene: jk0405: Urea carboxylase (EC 6.3.4.6)
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1579: Urea carboxylase (EC 6.3.4.6)
Urea carboxylase (EC 6.3.4.6)
Cg1143
*
Corynebacterium amycolatum SK46

Site:
position = -74
score = 6.31363
sequence = AGATTGTTGAACAATGT

Gene: CORAM0001_0543: Transcriptional regulator, GntR family
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0589: Transcriptional regulator, GntR family
 
Corynebacterium diphtheriae NCTC 13129
*
Corynebacterium efficiens YS-314

Site:
position = -47
score = 6.19719
sequence = GGATTGTTCAACAATGT

Gene: CE1068: Transcriptional regulator, GntR family
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -151
score = 6.44244
sequence = AGATTGTTGAACAATCT

Gene: cg1143: Transcriptional regulator, GntR family
 
Corynebacterium jeikeium K411

Gene: jk0404: Transcriptional regulator, GntR family
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1580: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
COG4336
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_0588: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314
*
Corynebacterium glutamicum ATCC 13032

Site:
position = 2
score = 5.2828
sequence = GAATCGTTCAACAATTT

Gene: cg2803: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
 
Corynebacterium jeikeium K411

Gene: jk0403: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1581: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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