Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Chvl - Rhodobacterales

Properties
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Hyphomonas neptunium ATCC 15444
Jannaschia sp. CCS1
Loktanella vestfoldensis SKA53
Oceanicaulis alexandrii HTCC2633
Oceanicola batsensis HTCC2597 7 1
Oceanicola granulosus HTCC2516 7 1
Paracoccus denitrificans PD1222
Rhodobacter sphaeroides 2.4.1 6 1
Rhodobacterales bacterium HTCC2654 7 1
Roseobacter sp. MED193 8 1
Roseovarius nubinhibens ISM 7 1
Roseovarius sp. 217
Silicibacter TM1040 7 1
Silicibacter pomeroyi DSS-3 7 1
Sulfitobacter sp. EE-36 7 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
chvI
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_1408: DNA-binding response regulator ChvI
 
Jannaschia sp. CCS1

Gene: Jann_0536: DNA-binding response regulator ChvI
 
Loktanella vestfoldensis SKA53

Gene: SKA53_13143: DNA-binding response regulator ChvI
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_11223: DNA-binding response regulator ChvI
*
Oceanicola batsensis HTCC2597

Site:
position = -91
score = 7.36484
sequence = GATTCG-(12)-GATTGT

Gene: OB2597_10164: DNA-binding response regulator ChvI
*
Oceanicola granulosus HTCC2516

Site:
position = -94
score = 8.21949
sequence = GATTCG-(11)-GATTCG

Gene: OG2516_08703: DNA-binding response regulator ChvI
 
Paracoccus denitrificans PD1222
*
Rhodobacter sphaeroides 2.4.1

Site:
position = -81
score = 7.33495
sequence = GATTCG-(12)-GATTCC

Gene: RSP_1681: DNA-binding response regulator ChvI
*
Rhodobacterales bacterium HTCC2654

Site:
position = -72
score = 7.37352
sequence = GATTCT-(13)-GATTCT

Site:
position = -90
score = 7.90228
sequence = GATTCG-(12)-GATTCT

Gene: RB2654_15916: DNA-binding response regulator ChvI
*
Roseobacter sp. MED193

Site:
position = -93
score = 8.21949
sequence = GATTCG-(12)-GATTCG

Gene: MED193_16484: DNA-binding response regulator ChvI
*
Roseovarius nubinhibens ISM

Site:
position = -106
score = 7.26244
sequence = GAGTCG-(12)-GATTCG

Gene: ISM_13540: DNA-binding response regulator ChvI
 
Roseovarius sp. 217

Gene: ROS217_04090: DNA-binding response regulator ChvI
*
Silicibacter TM1040

Site:
position = -89
score = 8.21949
sequence = GATTCG-(13)-GATTCG

Gene: TM1040_2441: DNA-binding response regulator ChvI
*
Silicibacter pomeroyi DSS-3

Site:
position = -91
score = 8.21949
sequence = GATTCG-(12)-GATTCG

Gene: SPO0710: DNA-binding response regulator ChvI
*
Sulfitobacter sp. EE-36

Site:
position = -95
score = 8.21949
sequence = GATTCG-(12)-GATTCG

Gene: EE36_04883: DNA-binding response regulator ChvI
DNA-binding response regulator ChvI
MED193_16489
 
Hyphomonas neptunium ATCC 15444
 
Jannaschia sp. CCS1
 
Loktanella vestfoldensis SKA53
 
Oceanicaulis alexandrii HTCC2633
 
Oceanicola batsensis HTCC2597
 
Oceanicola granulosus HTCC2516
 
Paracoccus denitrificans PD1222
 
Rhodobacter sphaeroides 2.4.1
 
Rhodobacterales bacterium HTCC2654
 
Roseobacter sp. MED193

Gene: MED193_16489: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Roseovarius nubinhibens ISM
 
Roseovarius sp. 217
 
Silicibacter TM1040
 
Silicibacter pomeroyi DSS-3
 
Sulfitobacter sp. EE-36
Sensor histidine kinase ChvG (EC 2.7.3.-)
chvG
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_1404: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Jannaschia sp. CCS1

Gene: Jann_0537: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Loktanella vestfoldensis SKA53

Gene: SKA53_13148: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_11218: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Oceanicola batsensis HTCC2597

Gene: OB2597_10159: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Oceanicola granulosus HTCC2516

Gene: OG2516_08698: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Paracoccus denitrificans PD1222
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1682: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_15921: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Roseobacter sp. MED193

Gene: MED193_16494: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Roseovarius nubinhibens ISM

Gene: ISM_13545: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Roseovarius sp. 217

Gene: ROS217_04085: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Silicibacter TM1040

Gene: TM1040_2440: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Silicibacter pomeroyi DSS-3

Gene: SPO0711: Sensor histidine kinase ChvG (EC 2.7.3.-)
 
Sulfitobacter sp. EE-36

Gene: EE36_04878: Sensor histidine kinase ChvG (EC 2.7.3.-)
Sensor histidine kinase ChvG (EC 2.7.3.-)
Jann_0538
 
Hyphomonas neptunium ATCC 15444
 
Jannaschia sp. CCS1

Gene: Jann_0538: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Loktanella vestfoldensis SKA53

Gene: SKA53_13153: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Oceanicaulis alexandrii HTCC2633
 
Oceanicola batsensis HTCC2597

Gene: OB2597_10154: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Oceanicola granulosus HTCC2516

Gene: OG2516_08693: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Paracoccus denitrificans PD1222

Gene: Pden_2851: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1683: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_15926: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Roseobacter sp. MED193

Gene: MED193_16499: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Roseovarius nubinhibens ISM

Gene: ISM_13550: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Roseovarius sp. 217

Gene: ROS217_04080: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Silicibacter TM1040

Gene: TM1040_2439: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Silicibacter pomeroyi DSS-3

Gene: SPO0712: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
 
Sulfitobacter sp. EE-36

Gene: EE36_04873: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
manX
 
Hyphomonas neptunium ATCC 15444
 
Jannaschia sp. CCS1

Gene: Jann_0539: Uncharacterized P-loop ATPase protein UPF0042
 
Loktanella vestfoldensis SKA53

Gene: SKA53_13158: Uncharacterized P-loop ATPase protein UPF0042
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_06889: Uncharacterized P-loop ATPase protein UPF0042
 
Oceanicola batsensis HTCC2597

Gene: OB2597_10149: Uncharacterized P-loop ATPase protein UPF0042
 
Oceanicola granulosus HTCC2516

Gene: OG2516_08688: Uncharacterized P-loop ATPase protein UPF0042
 
Paracoccus denitrificans PD1222

Gene: Pden_2850: Uncharacterized P-loop ATPase protein UPF0042
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1684: Uncharacterized P-loop ATPase protein UPF0042
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_15931: Uncharacterized P-loop ATPase protein UPF0042
 
Roseobacter sp. MED193

Gene: MED193_16504: Uncharacterized P-loop ATPase protein UPF0042
 
Roseovarius nubinhibens ISM

Gene: ISM_13555: Uncharacterized P-loop ATPase protein UPF0042
 
Roseovarius sp. 217

Gene: ROS217_04075: Uncharacterized P-loop ATPase protein UPF0042
 
Silicibacter TM1040

Gene: TM1040_2438: Uncharacterized P-loop ATPase protein UPF0042
 
Silicibacter pomeroyi DSS-3

Gene: SPO0713: Uncharacterized P-loop ATPase protein UPF0042
 
Sulfitobacter sp. EE-36

Gene: EE36_04868: Uncharacterized P-loop ATPase protein UPF0042
Uncharacterized P-loop ATPase protein UPF0042
HNE_0438
 
Hyphomonas neptunium ATCC 15444

Gene: HNE_0438: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Jannaschia sp. CCS1

Gene: Jann_0540: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Loktanella vestfoldensis SKA53

Gene: SKA53_13163: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_11213: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Oceanicola batsensis HTCC2597

Gene: OB2597_10144: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Oceanicola granulosus HTCC2516

Gene: OG2516_08683: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Paracoccus denitrificans PD1222

Gene: Pden_2849: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1685: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_15936: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Roseobacter sp. MED193

Gene: MED193_16509: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Roseovarius nubinhibens ISM

Gene: ISM_13560: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Roseovarius sp. 217

Gene: ROS217_04070: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Silicibacter TM1040

Gene: TM1040_2437: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Silicibacter pomeroyi DSS-3

Gene: SPO0714: PTS system IIA component, mannose/fructose/sorbose (Man) family
 
Sulfitobacter sp. EE-36

Gene: EE36_04863: PTS system IIA component, mannose/fructose/sorbose (Man) family
PTS system IIA component, mannose/fructose/sorbose (Man) family
phbH
 
Hyphomonas neptunium ATCC 15444
 
Jannaschia sp. CCS1

Gene: Jann_0541: Phosphocarrier protein HPr EC=2.7.11.-
 
Loktanella vestfoldensis SKA53

Gene: SKA53_13168: Phosphocarrier protein HPr EC=2.7.11.-
 
Oceanicaulis alexandrii HTCC2633

Gene: OA2633_11208: Phosphocarrier protein HPr EC=2.7.11.-
 
Oceanicola batsensis HTCC2597

Gene: OB2597_10139: Phosphocarrier protein HPr EC=2.7.11.-
 
Oceanicola granulosus HTCC2516

Gene: OG2516_08678: Phosphocarrier protein HPr EC=2.7.11.-
 
Paracoccus denitrificans PD1222

Gene: Pden_2848: Phosphocarrier protein HPr EC=2.7.11.-
 
Rhodobacter sphaeroides 2.4.1

Gene: RSP_1686: Phosphocarrier protein HPr EC=2.7.11.-
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_15941: Phosphocarrier protein HPr EC=2.7.11.-
 
Roseobacter sp. MED193

Gene: MED193_16514: Phosphocarrier protein HPr EC=2.7.11.-
 
Roseovarius nubinhibens ISM

Gene: ISM_13565: Phosphocarrier protein HPr EC=2.7.11.-
 
Roseovarius sp. 217

Gene: ROS217_04065: Phosphocarrier protein HPr EC=2.7.11.-
 
Silicibacter TM1040

Gene: TM1040_2436: Phosphocarrier protein HPr EC=2.7.11.-
 
Silicibacter pomeroyi DSS-3

Gene: SPO0715: Phosphocarrier protein HPr EC=2.7.11.-
 
Sulfitobacter sp. EE-36

Gene: EE36_04858: Phosphocarrier protein HPr EC=2.7.11.-
Phosphocarrier protein HPr EC=2.7.11.-
Jann_0542
 
Hyphomonas neptunium ATCC 15444
 
Jannaschia sp. CCS1

Gene: Jann_0542: hypothetical protein
 
Loktanella vestfoldensis SKA53
 
Oceanicaulis alexandrii HTCC2633
 
Oceanicola batsensis HTCC2597

Gene: OB2597_10134: hypothetical protein
 
Oceanicola granulosus HTCC2516

Gene: OG2516_08673: hypothetical protein
 
Paracoccus denitrificans PD1222
 
Rhodobacter sphaeroides 2.4.1
 
Rhodobacterales bacterium HTCC2654

Gene: RB2654_15946: hypothetical protein
 
Roseobacter sp. MED193

Gene: MED193_16519: hypothetical protein
 
Roseovarius nubinhibens ISM

Gene: ISM_13570: hypothetical protein
 
Roseovarius sp. 217

Gene: ROS217_04060: hypothetical protein
 
Silicibacter TM1040

Gene: TM1040_2435: hypothetical protein
 
Silicibacter pomeroyi DSS-3

Gene: SPO0716: hypothetical protein
 
Sulfitobacter sp. EE-36

Gene: EE36_04853: hypothetical protein
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD