Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CsoR - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 11 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46 3 1
Corynebacterium aurimucosum ATCC 700975 2 1
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314 2 1
Corynebacterium glutamicum ATCC 13032 4 2
Corynebacterium jeikeium K411 4 2
Corynebacterium kroppenstedtii DSM 44385 5 2
Corynebacterium urealyticum DSM 7109
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
copZ
*
Corynebacterium amycolatum SK46

Site:
position = -27
score = 6.18005
sequence = ATACCCATAGGGGGTAT

Gene: CORAM0001_1740: Copper insertion chaperone and transporter component
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -66
score = 6.28968
sequence = ATACCCCAGGGGGGTAT

Gene: cauri_2433: Copper insertion chaperone and transporter component
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314
 
Corynebacterium glutamicum ATCC 13032
 
Corynebacterium jeikeium K411

Gene: jk0516: Copper insertion chaperone and transporter component
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -51
score = 6.11681
sequence = ATACCCATGGGGGGTAT

Site:
position = -17
score = 5.87114
sequence = ATACCCCAGGAGGGTAT

Gene: ckrop_2049: Copper insertion chaperone and transporter component
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1397: Copper insertion chaperone and transporter component
Copper insertion chaperone and transporter component
copA
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1739: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2434: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2286: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Corynebacterium efficiens YS-314

Site:
position = -65
score = 6.45211
sequence = ATACCCCCCAGGGGTAT

Gene: CE0407: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -58
score = 6.51535
sequence = ATACCCCTAGGGGGTAT

Gene: cg0464: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Corynebacterium jeikeium K411

Site:
position = -26
score = 6.51535
sequence = ATACCCCCTAGGGGTAT

Gene: jk0638: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_2048: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1313: Copper-translocating P-type ATPase (EC 3.6.3.4)
Copper-translocating P-type ATPase (EC 3.6.3.4)
csoR
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1738: Copper resistance transcriptional regulator CsoR, CsoR family
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2147: Copper resistance transcriptional regulator CsoR, CsoR family
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314

Gene: CE0406: Copper resistance transcriptional regulator CsoR, CsoR family
 
Corynebacterium glutamicum ATCC 13032

Gene: cg0463: Copper resistance transcriptional regulator CsoR, CsoR family
 
Corynebacterium jeikeium K411

Gene: jk0639: Copper resistance transcriptional regulator CsoR, CsoR family
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_2047: Copper resistance transcriptional regulator CsoR, CsoR family
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1312: Copper resistance transcriptional regulator CsoR, CsoR family
Copper resistance transcriptional regulator CsoR, CsoR family
 
CRON 2.
copY
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0062: Copper insertion chaperone and transporter component
 
Corynebacterium efficiens YS-314
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -222
score = 6.23908
sequence = ATACCCCATAGGGGTAT

Gene: cg3282: Copper insertion chaperone and transporter component
*
Corynebacterium jeikeium K411

Site:
position = -93
score = 6.62919
sequence = ATACCCCCAGGGGGTAT

Site:
position = -67
score = 6.62919
sequence = ATACCCCCTGGGGGTAT

Gene: jk1430: Copper insertion chaperone and transporter component
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -65
score = 6.56595
sequence = ATACCCCCGGGGGGTAT

Gene: ckrop_1942: Copper insertion chaperone and transporter component
 
Corynebacterium urealyticum DSM 7109
Copper insertion chaperone and transporter component
copB
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0061: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium efficiens YS-314

Gene: CE0281: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3281: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium jeikeium K411

Gene: jk1429: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1943: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Corynebacterium urealyticum DSM 7109
Copper-translocating P-type ATPase (EC 3.6.3.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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