Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Znr - Mycobacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode:
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium abscessus ATCC 19977
Mycobacterium avium 104 2 1
Mycobacterium flavescens PYR-GCK 4 2
Mycobacterium leprae TN 2 1
Mycobacterium marinum M 2 1
Mycobacterium smegmatis str. MC2 155 2 1
Mycobacterium sp. JLS 2 1
Mycobacterium tuberculosis H37Rv 2 1
Mycobacterium vanbaalenii PYR-1 4 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
zocA
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
*2
Mycobacterium flavescens PYR-GCK

Gene: Mflv_2822: Zinc transporting ATPase (EC 3.6.3.3)

Site:
position = -1
score = 5.26885
sequence = CATGCGTATTATTGCATG

Gene: Mflv_5337: Zinc transporting ATPase (EC 3.6.3.3)
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155
 
Mycobacterium sp. JLS
 
Mycobacterium tuberculosis H37Rv
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -1
score = 5.26885
sequence = CATGCGTATTATTGCATG

Gene: Mvan_3700: Zinc transporting ATPase (EC 3.6.3.3)
Zinc transporting ATPase (EC 3.6.3.3)
cyaZ
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium avium 104
 2
Mycobacterium flavescens PYR-GCK

Gene: Mflv_5336: Adenylate cyclase (EC 4.6.1.1)

Gene: Mflv_2823: Adenylate cyclase (EC 4.6.1.1)
 
Mycobacterium leprae TN
 
Mycobacterium marinum M
 
Mycobacterium smegmatis str. MC2 155
 
Mycobacterium sp. JLS
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_3699: Adenylate cyclase (EC 4.6.1.1)
Adenylate cyclase (EC 4.6.1.1)
 
CRON 2.
znr
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_1679c: Zinc homeostasis transcriptional regulator Znr, ArsR family
*
Mycobacterium avium 104

Site:
position = -101
score = 6.22312
sequence = CATGCGTCATCATGCATG

Gene: MAV_2037: Zinc homeostasis transcriptional regulator Znr, ArsR family
*
Mycobacterium flavescens PYR-GCK

Site:
position = -11
score = 5.66829
sequence = CATGCACGGGCGTGCATG

Gene: Mflv_2718: Zinc homeostasis transcriptional regulator Znr, ArsR family
*
Mycobacterium leprae TN

Site:
position = -80
score = 6.07746
sequence = CATGCGCCATCACGCATG

Gene: ML0825: Zinc homeostasis transcriptional regulator Znr, ArsR family
*
Mycobacterium marinum M

Site:
position = -104
score = 6.26717
sequence = CATGCATCATCATGCATG

Gene: MMAR_3668: Zinc homeostasis transcriptional regulator Znr, ArsR family
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -50
score = 4.98448
sequence = CATGCGAATCAGCGCATG

Gene: MSMEG_4486: Zinc homeostasis transcriptional regulator Znr, ArsR family
*
Mycobacterium sp. JLS

Site:
position = -34
score = 5.36633
sequence = CATGCGAATCGATGCATG

Gene: Mjls_3457: Zinc homeostasis transcriptional regulator Znr, ArsR family
*
Mycobacterium tuberculosis H37Rv

Site:
position = -81
score = 6.26717
sequence = CATGCATCATCATGCATG

Gene: Rv2358: Zinc homeostasis transcriptional regulator Znr, ArsR family
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -32
score = 6.06368
sequence = CATGCACGGTCACGCATG

Gene: Mvan_3819: Zinc homeostasis transcriptional regulator Znr, ArsR family
Zinc homeostasis transcriptional regulator Znr, ArsR family
zur
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_1678c: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Mycobacterium avium 104

Gene: MAV_2036: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_2717: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Mycobacterium leprae TN

Gene: ML0824: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Mycobacterium marinum M

Gene: MMAR_3669: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_4487: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Mycobacterium sp. JLS

Gene: Mjls_3458: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Mycobacterium tuberculosis H37Rv

Gene: Rv2359: Zinc homeostasis transcriptional regulator Zur, Fur family
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_3820: Zinc homeostasis transcriptional regulator Zur, Fur family
Zinc homeostasis transcriptional regulator Zur, Fur family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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