Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SAH_riboswitch - Xanthomonadales

Properties
Regulator type: RNA regulatory element
Name: SAH_riboswitch
RFAM: RF01057
Regulation mode:
Biological process: Methionine metabolism
Effector: S-adenosylhomocysteine
Phylum: Proteobacteria/Gamma
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Stenotrophomonas maltophilia K279a 1 1
Xanthomonas axonopodis pv. citri str. 306 1 1
Xanthomonas campestris pv. campestris str. ATCC 33913 1 1
Xylella fastidiosa 9a5c
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ahcY
*
Stenotrophomonas maltophilia K279a

Site:
position = -121
score = 50.63
sequence = CCCTGCCGAGGGGCG...

Gene: Smlt0775: Adenosylhomocysteinase (EC 3.3.1.1)
*
Xanthomonas axonopodis pv. citri str. 306

Site:
position = -145
score = 37.1
sequence = TCTCGTCGAGGGGCG...

Gene: XAC0804: Adenosylhomocysteinase (EC 3.3.1.1)
*
Xanthomonas campestris pv. campestris str. ATCC 33913

Site:
position = -146
score = 40.83
sequence = CCTCGTCGAGGGGCG...

Gene: XCC0752: Adenosylhomocysteinase (EC 3.3.1.1)
 
Xylella fastidiosa 9a5c

Gene: XF1037: Adenosylhomocysteinase (EC 3.3.1.1)
Adenosylhomocysteinase (EC 3.3.1.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD