Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HpdR - Chloroflexia

Properties
Regulator type: Transcription factor
Regulator family: TrmB
Regulation mode: repressor
Biological process: Tyrosine degradation
Effector:
Phylum: Chloroflexi
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 2 1
Chloroflexus sp. Y-400-fl 2 1
Herpetosiphon aurantiacus ATCC 23779 2 1
Roseiflexus castenholzii DSM 13941
Roseiflexus sp. RS-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
hpdR
*
Chloroflexus aggregans DSM 9485

Site:
position = -36
score = 6.78745
sequence = CACCACTGATAAGTGGTA

Gene: Cagg_2745: Predicted transcriptional regulator of tyrosine catabolism, TrmB family
*
Chloroflexus sp. Y-400-fl

Site:
position = -63
score = 6.98388
sequence = CACCACTGATAAGTGGTG

Gene: Chy400_0871: Predicted transcriptional regulator of tyrosine catabolism, TrmB family
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -24
score = 6.19813
sequence = CACCACTAGGCAGTGGTG

Gene: Haur_2763: Predicted transcriptional regulator of tyrosine catabolism, TrmB family
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
Predicted transcriptional regulator of tyrosine catabolism, TrmB family
hpd
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2744: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_0872: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_2764: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD