Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SufR - Chloroflexia

Properties
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Chloroflexi
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 6 1
Chloroflexus sp. Y-400-fl 6 1
Herpetosiphon aurantiacus ATCC 23779 8 1
Roseiflexus castenholzii DSM 13941 6 1
Roseiflexus sp. RS-1 6 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
sufR
*
Chloroflexus aggregans DSM 9485

Site:
position = -64
score = 6.76627
sequence = TTTTTATTGACAATAGCTC

Gene: Cagg_0961: Iron-sulfur cluster regulator SufR
*
Chloroflexus sp. Y-400-fl

Site:
position = -64
score = 6.87441
sequence = TTTTTATTGACAATAGACT

Gene: Chy400_3749: Iron-sulfur cluster regulator SufR
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -87
score = 5.79678
sequence = ATTTTATTGACAGAAAATG

Gene: Haur_0414: Iron-sulfur cluster regulator SufR
*
Roseiflexus castenholzii DSM 13941

Site:
position = -62
score = 6.76627
sequence = TTTTTATTGACAATAGATA

Gene: Rcas_0303: Iron-sulfur cluster regulator SufR
*
Roseiflexus sp. RS-1

Site:
position = -61
score = 6.87441
sequence = TTTTTATTGACAATAGCCG

Gene: RoseRS_0707: Iron-sulfur cluster regulator SufR
Iron-sulfur cluster regulator SufR
sufC
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0960: Iron-sulfur cluster assembly ATPase protein SufC
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3750: Iron-sulfur cluster assembly ATPase protein SufC
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0413: Iron-sulfur cluster assembly ATPase protein SufC
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0304: Iron-sulfur cluster assembly ATPase protein SufC
 
Roseiflexus sp. RS-1

Gene: RoseRS_0708: Iron-sulfur cluster assembly ATPase protein SufC
Iron-sulfur cluster assembly ATPase protein SufC
sufD
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0959: Iron-sulfur cluster assembly protein SufD
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3751: Iron-sulfur cluster assembly protein SufD
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0412: Iron-sulfur cluster assembly protein SufD
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0305: Iron-sulfur cluster assembly protein SufD
 
Roseiflexus sp. RS-1

Gene: RoseRS_0709: Iron-sulfur cluster assembly protein SufD
Iron-sulfur cluster assembly protein SufD
Haur_0411
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0411: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Haur_0410
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0410: hypothetical protein
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
hypothetical protein
sufS
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0958: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3752: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0409: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0306: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
 
Roseiflexus sp. RS-1

Gene: RoseRS_0710: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
sufE2
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0957: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3753: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0408: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0307: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
 
Roseiflexus sp. RS-1

Gene: RoseRS_0711: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
sufB
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0956: Iron-sulfur cluster assembly protein SufB
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_3754: Iron-sulfur cluster assembly protein SufB
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_0407: Iron-sulfur cluster assembly protein SufB
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0308: Iron-sulfur cluster assembly protein SufB
 
Roseiflexus sp. RS-1

Gene: RoseRS_0712: Iron-sulfur cluster assembly protein SufB
Iron-sulfur cluster assembly protein SufB
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD