Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Caur_1779 - Chloroflexia

Properties
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process: Energy metabolism
Effector:
Phylum: Chloroflexi
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 4 2
Chloroflexus sp. Y-400-fl 3 2
Herpetosiphon aurantiacus ATCC 23779
Roseiflexus castenholzii DSM 13941
Roseiflexus sp. RS-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nuoL
*
Chloroflexus aggregans DSM 9485

Site:
position = -120
score = 6.10301
sequence = TGTTCTTTTAAAACGAACA

Gene: Cagg_2889: NADH-quinone oxidoreductase
*
Chloroflexus sp. Y-400-fl

Site:
position = -106
score = 5.98987
sequence = CGTTCTTCTTAGTAGAACG

Gene: Chy400_1925: NADH-quinone oxidoreductase
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0566: NADH-quinone oxidoreductase
 
Roseiflexus sp. RS-1

Gene: RoseRS_3854: NADH-quinone oxidoreductase
NADH-quinone oxidoreductase
Cagg_2890
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2890: hypothetical protein
 
Chloroflexus sp. Y-400-fl
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
hypothetical protein
PF10070
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2891: Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1924: Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0567: Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase
 
Roseiflexus sp. RS-1

Gene: RoseRS_3853: Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase
Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase
 
CRON 2.
Caur_1779
*
Chloroflexus aggregans DSM 9485

Site:
position = -104
score = 6.10301
sequence = TGTTCGTTTTAAAAGAACA

Gene: Cagg_2888: Putative transcriptional regulator of NADH dehydrogenase, LysR family
*
Chloroflexus sp. Y-400-fl

Site:
position = -317
score = 5.98987
sequence = CGTTCTACTAAGAAGAACG

Gene: Chy400_1926: Putative transcriptional regulator of NADH dehydrogenase, LysR family
 
Herpetosiphon aurantiacus ATCC 23779
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
Putative transcriptional regulator of NADH dehydrogenase, LysR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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