Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog AnsR - Nocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Aspartate utilization; Asparagine degradation
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Nocardia farcinica IFM 10152
Rhodococcus erythropolis PR4 4 2
Rhodococcus opacus B4 4 2
Rhodococcus sp. RHA1 4 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
aspA
 
Nocardia farcinica IFM 10152
*
Rhodococcus erythropolis PR4

Site:
position = -127
score = 5.69239
sequence = ACCTGTCAGACAGCC

Site:
position = -235
score = 5.92955
sequence = AGCTGTCTGACAGGT

Gene: RER_56380: Aspartate ammonia-lyase (EC 4.3.1.1)
*
Rhodococcus opacus B4

Site:
position = -239
score = 5.92955
sequence = AGCTGTCTGACAGGT

Site:
position = -132
score = 5.69239
sequence = ACCTGTCTGACAGCC

Gene: ROP_43700: Aspartate ammonia-lyase (EC 4.3.1.1)
*
Rhodococcus sp. RHA1

Site:
position = -239
score = 5.92955
sequence = AGCTGTCTGACAGGT

Site:
position = -132
score = 5.69239
sequence = ACCTGTCTGACAGCC

Gene: RHA1_ro04453: Aspartate ammonia-lyase (EC 4.3.1.1)
Aspartate ammonia-lyase (EC 4.3.1.1)
ansP
 
Nocardia farcinica IFM 10152
 
Rhodococcus erythropolis PR4

Gene: RER_56390: L-asparagine permease
 
Rhodococcus opacus B4

Gene: ROP_43690: L-asparagine permease
 
Rhodococcus sp. RHA1

Gene: RHA1_ro04452: L-asparagine permease
L-asparagine permease
ansA
 
Nocardia farcinica IFM 10152
 
Rhodococcus erythropolis PR4

Gene: RER_56400: L-asparaginase (EC 3.5.1.1)
 
Rhodococcus opacus B4

Gene: ROP_43680: L-asparaginase (EC 3.5.1.1)
 
Rhodococcus sp. RHA1

Gene: RHA1_ro04451: L-asparaginase (EC 3.5.1.1)
L-asparaginase (EC 3.5.1.1)
 
CRON 2.
ansR
 
Nocardia farcinica IFM 10152
*
Rhodococcus erythropolis PR4

Site:
position = -104
score = 5.69239
sequence = GGCTGTCTGACAGGT

Site:
position = 4
score = 5.92955
sequence = ACCTGTCAGACAGCT

Gene: RER_56370: L-asparagine operon repressor, GntR family
*
Rhodococcus opacus B4

Site:
position = 4
score = 5.92955
sequence = ACCTGTCAGACAGCT

Site:
position = -103
score = 5.69239
sequence = GGCTGTCAGACAGGT

Gene: ROP_43710: L-asparagine operon repressor, GntR family
*
Rhodococcus sp. RHA1

Site:
position = 40
score = 5.92955
sequence = ACCTGTCAGACAGCT

Site:
position = -67
score = 5.69239
sequence = GGCTGTCAGACAGGT

Gene: RHA1_ro04454: L-asparagine operon repressor, GntR family
L-asparagine operon repressor, GntR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD