Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SCO4158 - Streptomycetaceae

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Nucleoside utilization
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptomyces scabiei 87.22 5 3
Streptomyces griseus subsp. griseus NBRC 13350 5 3
Streptomyces coelicolor A3(2) 5 3
Streptomyces avermitilis MA-4680 5 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pnp
*
Streptomyces scabiei 87.22

Site:
position = -39
score = 6.35928
sequence = CATCTACGCGCGTAGGCC

Gene: SCAB_34681: Purine nucleoside phosphorylase (EC 2.4.2.1)
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -40
score = 6.34522
sequence = CATCTACGCGCGTAGGGA

Gene: SGR_2626: Purine nucleoside phosphorylase (EC 2.4.2.1)
*
Streptomyces coelicolor A3(2)

Site:
position = -39
score = 6.08374
sequence = CATCTACGCGCGTAGCCG

Gene: SCO4917: Purine nucleoside phosphorylase (EC 2.4.2.1)
*
Streptomyces avermitilis MA-4680

Site:
position = -40
score = 6.35928
sequence = CATCTACGCGCGTAGGCC

Gene: SAV_3342: Purine nucleoside phosphorylase (EC 2.4.2.1)
Purine nucleoside phosphorylase (EC 2.4.2.1)
 
CRON 2.
deoC
*
Streptomyces scabiei 87.22

Site:
position = -28
score = 6.49932
sequence = CTGCTACGCGCGTAGATA

Gene: SCAB_34741: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -34
score = 6.17647
sequence = TCGCTACGCGCGTAGATA

Gene: SGR_2629: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
*
Streptomyces coelicolor A3(2)

Site:
position = -34
score = 6.49932
sequence = CCGCTACGCGCGTAGATA

Gene: SCO4914: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
*
Streptomyces avermitilis MA-4680

Site:
position = -34
score = 6.49932
sequence = CTGCTACGCGCGTAGATA

Gene: SAV_3346: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Deoxyribose-phosphate aldolase (EC 4.1.2.4)
aldH1
 
Streptomyces scabiei 87.22

Gene: SCAB_34751: Aldehyde dehydrogenase (EC 1.2.1.3)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_2630: Aldehyde dehydrogenase (EC 1.2.1.3)
 
Streptomyces coelicolor A3(2)

Gene: SCO4913: Aldehyde dehydrogenase (EC 1.2.1.3)
 
Streptomyces avermitilis MA-4680

Gene: SAV_3347: Aldehyde dehydrogenase (EC 1.2.1.3)
Aldehyde dehydrogenase (EC 1.2.1.3)
aldH2
 
Streptomyces scabiei 87.22

Gene: SCAB_34761: Aldehyde dehydrogenase (EC 1.2.1.3)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_2631: Aldehyde dehydrogenase (EC 1.2.1.3)
 
Streptomyces coelicolor A3(2)

Gene: SCO4912: Aldehyde dehydrogenase (EC 1.2.1.3)
 
Streptomyces avermitilis MA-4680

Gene: SAV_3348: Aldehyde dehydrogenase (EC 1.2.1.3)
Aldehyde dehydrogenase (EC 1.2.1.3)
 
CRON 3.
guaT
*
Streptomyces scabiei 87.22

Site:
position = -124
score = 4.75299
sequence = GGTCTACGCGCGGAGATG

Gene: SCAB_50961: Guanine-hypoxanthine permease
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -147
score = 5.01447
sequence = GGTCTACGCGCGGAGATA

Gene: SGR_3165: Guanine-hypoxanthine permease
*
Streptomyces coelicolor A3(2)

Site:
position = -140
score = 5.01447
sequence = GGTCTACGCGCGGAGATA

Gene: SCO4334: Guanine-hypoxanthine permease
*
Streptomyces avermitilis MA-4680

Site:
position = -195
score = 4.75299
sequence = GGTCTACGCGCGGAGATG

Gene: SAV_3897: Guanine-hypoxanthine permease
Guanine-hypoxanthine permease
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD