Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NmlR - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator
Biological process: Carbonyl stress response
Effector: Diamide
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Ralstonia solanacearum GMI1000
Ralstonia pickettii 12J 2 1
Ralstonia metallidurans CH34
Ralstonia eutropha JMP134
Ralstonia eutropha H16
Cupriavidus taiwanensis
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nmlR
 
Ralstonia solanacearum GMI1000
*
Ralstonia pickettii 12J

Site:
position = -33
score = 6.05627
sequence = CTTAGAGTGCGCTCTAAC

Gene: Rpic_2478: Carbonyl stress transcriptional regulator, MerR family
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134
 
Ralstonia eutropha H16
 
Cupriavidus taiwanensis
Carbonyl stress transcriptional regulator, MerR family
pcaC
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J

Gene: Rpic_2477: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134

Gene: Reut_B5696: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
 
Ralstonia eutropha H16
 
Cupriavidus taiwanensis

Gene: RALTA_B0454: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD