Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog MocR - Rhizobiales

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Rhizopine catabolism
Effector: rhizopine
Phylum: Proteobacteria/Alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Agrobacterium tumefaciens str. C58 (Cereon)
Azorhizobium caulinodans ORS 571
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099 4 2
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42 4 2
Rhizobium leguminosarum bv. viciae 3841 4 2
Rhizobium sp. NGR234 4 2
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021 4 2
Xanthobacter autotrophicus Py2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
mocR
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
*2
Mesorhizobium loti MAFF303099

Gene: mll5838: Transcriptional regulator, LacI family

Site:
position = -67
score = 5.36427
sequence = AAAGATAGTTTCTATCATT

Gene: mll4997: Transcriptional regulator, LacI family
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
*
Rhizobium etli CFN 42

Site:
position = -67
score = 5.75716
sequence = CTTGATGTAATCTATCAAA

Gene: RHE_PE00447: Transcriptional regulator, LacI family
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -68
score = 6.04578
sequence = CTTGATATAATCTATCAAA

Site:
position = -26
score = 4.85484
sequence = CATGATTGAATCCATCAGG

Gene: pRL110623: Transcriptional regulator, LacI family
*
Rhizobium sp. NGR234

Site:
position = -74
score = 5.64775
sequence = CATGATATATTCTCTCAAA

Gene: NGR_b17120: Transcriptional regulator, LacI family
 
Rhodopseudomonas palustris CGA009
*
Sinorhizobium meliloti 1021

Site:
position = -71
score = 5.64775
sequence = CATGATATATTCTCTCAAT

Gene: SMb20817: Transcriptional regulator, LacI family
 
Xanthobacter autotrophicus Py2
Transcriptional regulator, LacI family
 
CRON 2.
mocD
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
*
Mesorhizobium loti MAFF303099

Site:
position = -117
score = 5.36427
sequence = AATGATAGAAACTATCTTT

Gene: mlr4998: putative hydrocarbon oxygenase MocD
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
*
Rhizobium etli CFN 42

Site:
position = -81
score = 5.75716
sequence = TTTGATAGATTACATCAAG

Gene: RHE_PE00446: putative hydrocarbon oxygenase MocD
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -124
score = 4.85484
sequence = CCTGATGGATTCAATCATG

Site:
position = -82
score = 6.04578
sequence = TTTGATAGATTATATCAAG

Gene: pRL110622: putative hydrocarbon oxygenase MocD
*
Rhizobium sp. NGR234

Site:
position = -104
score = 5.64775
sequence = TTTGAGAGAATATATCATG

Gene: NGR_b17110: putative hydrocarbon oxygenase MocD
 
Rhodopseudomonas palustris CGA009
*
Sinorhizobium meliloti 1021

Site:
position = -153
score = 5.64775
sequence = ATTGAGAGAATATATCATG

Gene: SM_b20818: putative hydrocarbon oxygenase MocD
 
Xanthobacter autotrophicus Py2
putative hydrocarbon oxygenase MocD
mocE
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
 
Mesorhizobium loti MAFF303099

Gene: mlr4999: putative Rieske-like ferredoxin MocE
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
 
Rhizobium etli CFN 42

Gene: RHE_PE00445: putative Rieske-like ferredoxin MocE
 
Rhizobium leguminosarum bv. viciae 3841

Gene: pRL110621: putative Rieske-like ferredoxin MocE
 
Rhizobium sp. NGR234

Gene: NGR_b17100: putative Rieske-like ferredoxin MocE
 
Rhodopseudomonas palustris CGA009
 
Sinorhizobium meliloti 1021

Gene: SMb20819: putative Rieske-like ferredoxin MocE
 
Xanthobacter autotrophicus Py2
putative Rieske-like ferredoxin MocE
mocF
 
Agrobacterium tumefaciens str. C58 (Cereon)
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
 
Mesorhizobium loti MAFF303099

Gene: mlr5000: putative ferredoxin reductase protein MocF
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
 
Rhizobium etli CFN 42

Gene: RHE_PE00444: putative ferredoxin reductase protein MocF
 
Rhizobium leguminosarum bv. viciae 3841

Gene: pRL110620: putative ferredoxin reductase protein MocF
 
Rhizobium sp. NGR234

Gene: NGR_b17090: putative ferredoxin reductase protein MocF
 
Rhodopseudomonas palustris CGA009
 
Sinorhizobium meliloti 1021

Gene: SMb20820: putative ferredoxin reductase protein MocF
 
Xanthobacter autotrophicus Py2
putative ferredoxin reductase protein MocF
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD