Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LfaR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 23 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Citrobacter koseri ATCC BAA-895 3 2
Edwardsiella tarda EIB202
Enterobacter sp. 638 3 2
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043 3 2
Escherichia coli str. K-12 substr. MG1655
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 3 2
Photorhabdus luminescens subsp. laumondii TTO1
Proteus mirabilis HI4320
Salmonella typhimurium LT2
Serratia proteamaculans 568 3 2
Yersinia pestis KIM 3 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lfaR
*
Citrobacter koseri ATCC BAA-895

Site:
position = -23
score = 6.1989
sequence = ATGAAAATTTTTTCAT

Gene: CKO_02295: Transcriptional regulator for sugar utilization, LacI family
 
Edwardsiella tarda EIB202
*
Enterobacter sp. 638

Site:
position = -41
score = 5.594
sequence = ATGAAAATTTTTGCAT

Gene: Ent638_1314: Transcriptional regulator for sugar utilization, LacI family
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -41
score = 5.18278
sequence = ATGAAAACTTTGTCAT

Site:
position = -119
score = 5.3033
sequence = TTGAAAACATTTTCAT

Site:
position = -241
score = 4.69839
sequence = ATCAGAACATTTTCAT

Gene: ECA1966: Transcriptional regulator for sugar utilization, LacI family
 
Escherichia coli str. K-12 substr. MG1655
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -41
score = 5.94621
sequence = ATGAAAATTCTTTCAT

Site:
position = -118
score = 5.32231
sequence = ATGCAAGTTTTTTCAT

Gene: KPN_00854: Transcriptional regulator for sugar utilization, LacI family
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
*
Serratia proteamaculans 568

Site:
position = -41
score = 5.71451
sequence = GTGAAAATATTTTCAT

Site:
position = -118
score = 5.23012
sequence = TTGCAAAAATTTTCAT

Gene: Spro_3600: Transcriptional regulator for sugar utilization, LacI family
*
Yersinia pestis KIM

Site:
position = -118
score = 4.95844
sequence = TTGAAAGAATTCTCAT

Site:
position = -41
score = 6.1989
sequence = ATGAAAATTTTTTCAT

Gene: y3231: Transcriptional regulator for sugar utilization, LacI family
Transcriptional regulator for sugar utilization, LacI family
 
CRON 2.
lfaT
*
Citrobacter koseri ATCC BAA-895

Site:
position = -190
score = 4.8331
sequence = ATGAGAAAACTTGCAC

Site:
position = -267
score = 6.43994
sequence = ATGAAAAAATTTTCAT

Gene: CKO_02296: Hexuronate-like transporter
 
Edwardsiella tarda EIB202
*
Enterobacter sp. 638

Site:
position = -265
score = 5.83503
sequence = ATGCAAAAATTTTCAT

Gene: Ent638_1313: Hexuronate-like transporter
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -95
score = 4.57788
sequence = ATGAAAATGTTCTGAT

Site:
position = -217
score = 5.57983
sequence = ATGAAAATGTTTTCAA

Site:
position = -295
score = 5.3033
sequence = ATGACAAAGTTTTCAT

Gene: ECA1967: Hexuronate-like transporter
 
Escherichia coli str. K-12 substr. MG1655
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -196
score = 5.58233
sequence = ATGAAAAAACTTGCAT

Site:
position = -273
score = 6.16825
sequence = ATGAAAGAATTTTCAT

Gene: KPN_00853: Hexuronate-like transporter
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
*
Serratia proteamaculans 568

Site:
position = -340
score = 6.1751
sequence = ATGAAAATATTTTCAC

Site:
position = -263
score = 5.38613
sequence = ATGAAAATTTTTGCAA

Gene: Spro_3599: Hexuronate-like transporter
*
Yersinia pestis KIM

Site:
position = -291
score = 5.13344
sequence = ATGAGAATTCTTTCAA

Site:
position = -368
score = 6.43994
sequence = ATGAAAAAATTTTCAT

Gene: y3232: Hexuronate-like transporter
Hexuronate-like transporter
aguA
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_02297: Predicted Alpha-glucuronidase (EC 3.2.1.139), glycoside hydrolase family 31
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_1312: Predicted Alpha-glucuronidase (EC 3.2.1.139), glycoside hydrolase family 31
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA1968: Predicted Alpha-glucuronidase (EC 3.2.1.139), glycoside hydrolase family 31
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_00852: Predicted Alpha-glucuronidase (EC 3.2.1.139), glycoside hydrolase family 31
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568

Gene: Spro_3598: Predicted Alpha-glucuronidase (EC 3.2.1.139), glycoside hydrolase family 31
 
Yersinia pestis KIM

Gene: y3233: Predicted Alpha-glucuronidase (EC 3.2.1.139), glycoside hydrolase family 31
Predicted Alpha-glucuronidase (EC 3.2.1.139), glycoside hydrolase family 31
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD