Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU2934 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process:
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 20 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692 1 1
Desulfomicrobium baculatum DSM 4028 1 1
Desulfovibrio desulfuricans G20 1 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 1 1
Desulfovibrio vulgaris Hildenborough 1 1
Desulfovibrio vulgaris str. Miyazaki F 1 1
Lawsonia intracellularis PHE/MN1-00 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lpxC
*
Desulfohalobium retbaense DSM 5692

Site:
position = -114
score = 3.78013
sequence = TGTGTCAAAGGGACA

Site:
position = -136
score = 3.61836
sequence = TGTCAAAGAACAACA

Gene: Dret_2081: UDP-3-0-acyl N-acetylglucosamine deacetylase
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -136
score = 4.22011
sequence = TGTTGTTTTTTAGCA

Gene: Dbac_2789: UDP-3-0-acyl N-acetylglucosamine deacetylase
*
Desulfovibrio desulfuricans G20

Site:
position = -136
score = 4.25478
sequence = TGTAAAAAAACCACA

Site:
position = -120
score = 3.96835
sequence = GGTGTAAAAAACACA

Site:
position = -118
score = 4.19031
sequence = TGTAAAAAACACACA

Gene: Dde_2986: UDP-3-0-acyl N-acetylglucosamine deacetylase
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -128
score = 3.60022
sequence = TGTAAAAATACAACT

Site:
position = -161
score = 3.95961
sequence = TGCAAAAAAACCACA

Site:
position = -131
score = 4.56631
sequence = TGTTGTAAAAATACA

Gene: Desal_2604: UDP-3-0-acyl N-acetylglucosamine deacetylase
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -135
score = 3.94035
sequence = TGTGCAGAACACACA

Site:
position = -73
score = 4.45223
sequence = TGTTTATTTACAGCA

Site:
position = -117
score = 3.86749
sequence = TGCGTGGATGACACA

Gene: DVU2917: UDP-3-0-acyl N-acetylglucosamine deacetylase
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -160
score = 3.50223
sequence = TGTGTTTTCCACACC

Site:
position = -162
score = 4.61514
sequence = TGTGTGTTTTCCACA

Site:
position = -134
score = 3.92225
sequence = TGCGCAAAAGCCACA

Site:
position = -115
score = 4.33492
sequence = TGCGTGAAACACACA

Gene: DvMF_1446: UDP-3-0-acyl N-acetylglucosamine deacetylase
*
Lawsonia intracellularis PHE/MN1-00

Site:
position = -220
score = 4.81254
sequence = TGTTGTTAAAAAACA

Site:
position = -117
score = 4.82681
sequence = TGTTGTAAAAAAACA

Site:
position = -158
score = 3.87709
sequence = CGTTTTATTACAGCA

Site:
position = -217
score = 4.51528
sequence = TGTTAAAAAACAACA

Gene: LI0627: UDP-3-0-acyl N-acetylglucosamine deacetylase
UDP-3-0-acyl N-acetylglucosamine deacetylase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD