Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU2394 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Energy metabolism
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692 9 1
Desulfomicrobium baculatum DSM 4028 12 3
Desulfovibrio desulfuricans G20 8 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1 11 2
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 1 1
Desulfovibrio vulgaris Hildenborough 1 1
Desulfovibrio vulgaris str. Miyazaki F 1 1
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
adh
*
Desulfohalobium retbaense DSM 5692

Site:
position = -296
score = 4.53251
sequence = TGTATCATTTTTTCCCA

Site:
position = -264
score = 4.75036
sequence = CGTGTCATTTTGCTACA

Gene: Dret_0199: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -230
score = 4.72583
sequence = AGGATCAAAGTGATACA

Site:
position = -264
score = 5.27077
sequence = TGAGTCATTTTGACTCA

Gene: Dbac_3326: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Desulfovibrio desulfuricans G20

Site:
position = -258
score = 4.86032
sequence = TGTATCAGAATGAAACA

Site:
position = -200
score = 4.62339
sequence = GGGGTCAAATGGACACA

Gene: Dde_3523: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -264
score = 5.32506
sequence = TGGTTCATATTGACACA

Gene: Desal_0284: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -312
score = 4.90552
sequence = TGTGGCATTTCGACCCA

Gene: DVU2405: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -311
score = 4.75673
sequence = TGTAGCATTTCGACCCA

Gene: DvMF_0321: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Lawsonia intracellularis PHE/MN1-00
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
hdrC
 2
Desulfohalobium retbaense DSM 5692

Gene: Dret_0198: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)

Gene: Dret_2317: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -84
score = 4.79121
sequence = TGTATCAATTTGGATCA

Site:
position = -50
score = 4.34852
sequence = TGTGTCAAAAAGGTTCA

Gene: Dbac_0848: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
 2
Desulfovibrio desulfuricans G20

Gene: Dde_3524: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)

Gene: Dde_1207: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2098: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
*
Desulfovibrio magneticus RS-1

Site:
position = -233
score = 4.97167
sequence = TGTACCAAAATGGCACA

Gene: DMR_01900: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02729: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0602: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2404: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0322: CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
 
Lawsonia intracellularis PHE/MN1-00
CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1)
hdrB
 2
Desulfohalobium retbaense DSM 5692

Gene: Dret_0197: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)

Gene: Dret_2316: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0849: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 2
Desulfovibrio desulfuricans G20

Gene: Dde_3525: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)

Gene: Dde_1208: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2099: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 
Desulfovibrio magneticus RS-1

Gene: DMR_01910: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02730: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0601: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2403: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0323: CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
 
Lawsonia intracellularis PHE/MN1-00
CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1)
hdrA
 2
Desulfohalobium retbaense DSM 5692

Gene: Dret_0196: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)

Gene: Dret_2315: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0850: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 2
Desulfovibrio desulfuricans G20

Gene: Dde_3526: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)

Gene: Dde_1209: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2100: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 
Desulfovibrio magneticus RS-1

Gene: DMR_01920: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02731: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0600: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2402: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0324: CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
 
Lawsonia intracellularis PHE/MN1-00
CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1)
hdrD
 2
Desulfohalobium retbaense DSM 5692

Gene: Dret_0195: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)

Gene: Dret_2314: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0851: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
 2
Desulfovibrio desulfuricans G20

Gene: Dde_1210: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)

Gene: Dde_3527: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_01930: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0599: CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
CoB--CoM heterodisulfide reductase subunit D (EC 1.8.98.1)
DVU2401
 2
Desulfohalobium retbaense DSM 5692

Gene: Dret_0194: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein

Gene: Dret_2313: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0852: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 2
Desulfovibrio desulfuricans G20

Gene: Dde_1211: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein

Gene: Dde_3528: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2101: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_01940: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02732: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0598: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2401: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0325: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
 
Lawsonia intracellularis PHE/MN1-00
coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
DVU2400
 2
Desulfohalobium retbaense DSM 5692

Gene: Dret_0193: heterodisulfide reductase, iron-sulfur binding subunit, putative

Gene: Dret_2312: heterodisulfide reductase, iron-sulfur binding subunit, putative
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0853: heterodisulfide reductase, iron-sulfur binding subunit, putative
 2
Desulfovibrio desulfuricans G20

Gene: Dde_1212: heterodisulfide reductase, iron-sulfur binding subunit, putative

Gene: Dde_3529: heterodisulfide reductase, iron-sulfur binding subunit, putative
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2102: heterodisulfide reductase, iron-sulfur binding subunit, putative
 
Desulfovibrio magneticus RS-1

Gene: DMR_01950: heterodisulfide reductase, iron-sulfur binding subunit, putative
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02733: heterodisulfide reductase, iron-sulfur binding subunit, putative
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0597: heterodisulfide reductase, iron-sulfur binding subunit, putative
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2400: heterodisulfide reductase, iron-sulfur binding subunit, putative
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0326: heterodisulfide reductase, iron-sulfur binding subunit, putative
 
Lawsonia intracellularis PHE/MN1-00
heterodisulfide reductase, iron-sulfur binding subunit, putative
DVU2399
 2
Desulfohalobium retbaense DSM 5692

Gene: Dret_2311: oxidoreductase FAD/NAD(P)-binding domain protein

Gene: Dret_0192: oxidoreductase FAD/NAD(P)-binding domain protein
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0854: oxidoreductase FAD/NAD(P)-binding domain protein
 2
Desulfovibrio desulfuricans G20

Gene: Dde_1213: oxidoreductase FAD/NAD(P)-binding domain protein

Gene: Dde_3530: oxidoreductase FAD/NAD(P)-binding domain protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2103: oxidoreductase FAD/NAD(P)-binding domain protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_01960: oxidoreductase FAD/NAD(P)-binding domain protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02734: oxidoreductase FAD/NAD(P)-binding domain protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0596: oxidoreductase FAD/NAD(P)-binding domain protein
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2399: oxidoreductase FAD/NAD(P)-binding domain protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0327: oxidoreductase FAD/NAD(P)-binding domain protein
 
Lawsonia intracellularis PHE/MN1-00
oxidoreductase FAD/NAD(P)-binding domain protein
Dbac_0855
 2
Desulfohalobium retbaense DSM 5692

Gene: Dret_0191: Rubrerythrin

Gene: Dret_2310: Rubrerythrin
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0855: Rubrerythrin
 
Desulfovibrio desulfuricans G20

Gene: Dde_1214: Rubrerythrin
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_01970: Rubrerythrin
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2939: Rubrerythrin
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2398: Rubrerythrin
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0328: Rubrerythrin
 
Lawsonia intracellularis PHE/MN1-00
Rubrerythrin
 
CRON 2.
adh
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0202: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -282
score = 4.72583
sequence = TGTATCACTTTGATCCT

Site:
position = -248
score = 5.27077
sequence = TGAGTCAAAATGACTCA

Gene: Dbac_3325: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Desulfovibrio desulfuricans G20

Gene: Dde_3534: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
*
Desulfovibrio magneticus RS-1

Site:
position = 10
score = 5.07944
sequence = TGGGTCAAAATGCTCCA

Gene: DMR_02380: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0289: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2396: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0330: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
 
Lawsonia intracellularis PHE/MN1-00
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
DMR_02390
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0201: PAS/PAC sensor signal transduction histidine kinase
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_3324: PAS/PAC sensor signal transduction histidine kinase
 
Desulfovibrio desulfuricans G20

Gene: Dde_3535: PAS/PAC sensor signal transduction histidine kinase
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_02390: PAS/PAC sensor signal transduction histidine kinase
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0288: PAS/PAC sensor signal transduction histidine kinase
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2395: PAS/PAC sensor signal transduction histidine kinase
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0331: PAS/PAC sensor signal transduction histidine kinase
 
Lawsonia intracellularis PHE/MN1-00
PAS/PAC sensor signal transduction histidine kinase
DMR_02400
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0200: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_3323: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio desulfuricans G20

Gene: Dde_3536: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_02400: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0287: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2394: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0332: two component, sigma54 specific, transcriptional regulator, Fis family
 
Lawsonia intracellularis PHE/MN1-00
two component, sigma54 specific, transcriptional regulator, Fis family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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