Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU1419 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 11 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692 3 1
Desulfomicrobium baculatum DSM 4028 3 1
Desulfovibrio desulfuricans G20 2 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 5 2
Desulfovibrio vulgaris Hildenborough 3 2
Desulfovibrio vulgaris str. Miyazaki F 3 1
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DVU0036
*
Desulfohalobium retbaense DSM 5692

Site:
position = -153
score = 5.71817
sequence = TGTGCAGCGCATTGCACA

Gene: Dret_2390: zinc resistance-associated protein
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -190
score = 5.27868
sequence = AATGCAGCATTTTGCACA

Site:
position = -161
score = 5.30225
sequence = TGTGCAACAGGCGGTACA

Gene: Dbac_2711: zinc resistance-associated protein
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
*2
Desulfovibrio salexigens DSM 2638

Site:
position = -150
score = 4.73217
sequence = TGCGCAATTCATTGCATA

Gene: Desal_0681: zinc resistance-associated protein

Site:
position = -158
score = 6.23813
sequence = TGTGCAATATGATGCACA

Gene: Desal_0680: zinc resistance-associated protein
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -149
score = 5.29532
sequence = TGTGCATCACCATGCACA

Gene: DVU0036: zinc resistance-associated protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
zinc resistance-associated protein
Desal_0679
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00403: hypothetical protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0679: hypothetical protein
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
DVU1418
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_2391: PAS/PAC sensor signal transduction histidine kinase
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2712: PAS/PAC sensor signal transduction histidine kinase
*
Desulfovibrio desulfuricans G20

Site:
position = -141
score = 5.63929
sequence = TGTGCAAGATATTGCGCA

Gene: Dde_1684: PAS/PAC sensor signal transduction histidine kinase
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0678: PAS/PAC sensor signal transduction histidine kinase
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -208
score = 5.40013
sequence = TGTGCATCTTATTGCACG

Site:
position = -179
score = 5.3199
sequence = TGTGCCATCGTTTGCACA

Gene: DVU1418: PAS/PAC sensor signal transduction histidine kinase
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -177
score = 5.72123
sequence = TGTGCAATTTTGTGCACA

Site:
position = -47
score = 4.79557
sequence = TGTGCAGCAGGGTGCGGA

Gene: DvMF_0213: PAS/PAC sensor signal transduction histidine kinase
 
Lawsonia intracellularis PHE/MN1-00
PAS/PAC sensor signal transduction histidine kinase
DVU1419
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_2392: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2713: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio desulfuricans G20

Gene: Dde_1685: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0677: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU1419: two component, sigma54 specific, transcriptional regulator, Fis family
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0215: two component, sigma54 specific, transcriptional regulator, Fis family
 
Lawsonia intracellularis PHE/MN1-00
two component, sigma54 specific, transcriptional regulator, Fis family
DvMF_0216
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough
 2
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0216: hypothetical protein

Gene: DvMF_1738: hypothetical protein
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD