Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU0151 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Proteobacteria/Delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3 1
Desulfovibrio magneticus RS-1 4 1
Desulfovibrio piger ATCC 29098 3 1
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough 3 1
Desulfovibrio vulgaris str. Miyazaki F 3 1
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DMR_42220
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
*
Desulfovibrio magneticus RS-1

Site:
position = -190
score = 5.00449
sequence = TTTTGCGCGATCAG

Site:
position = -124
score = 4.65068
sequence = TTTTTCACGAAAAA

Gene: DMR_42220: universal stress protein family
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2100: universal stress protein family
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0804: universal stress protein family
 
Lawsonia intracellularis PHE/MN1-00
universal stress protein family
DVU0150
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Site:
position = -94
score = 4.32858
sequence = TTTTTCACATTCAC

Site:
position = -166
score = 4.55814
sequence = TTTTTCGCGCAAAA

Gene: Ddes_1642: hypothetical membrane protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_42230: hypothetical membrane protein
*
Desulfovibrio piger ATCC 29098

Site:
position = -170
score = 4.3976
sequence = GTTTGCGCAAGCGG

Gene: DESPIG_02990: hypothetical membrane protein
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -129
score = 4.45015
sequence = CTTTTCGGGAACAC

Site:
position = -302
score = 4.45952
sequence = GTTTTCGCAGACGG

Gene: DVU0150: hypothetical membrane protein
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -267
score = 4.38499
sequence = CTTTGCGCGATCGT

Site:
position = -353
score = 4.31553
sequence = TCTTTCGCAACAAG

Gene: DvMF_2341: hypothetical membrane protein
 
Lawsonia intracellularis PHE/MN1-00
hypothetical membrane protein
DVU0149
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1641: TSUP family transmembrane protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_42240: TSUP family transmembrane protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02991: TSUP family transmembrane protein
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0149: TSUP family transmembrane protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_2342: TSUP family transmembrane protein
 
Lawsonia intracellularis PHE/MN1-00
TSUP family transmembrane protein
DVU0148
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1640: lipoprotein, putative
 
Desulfovibrio magneticus RS-1

Gene: DMR_42250: lipoprotein, putative
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02992: lipoprotein, putative
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0148: lipoprotein, putative
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_2343: lipoprotein, putative
 
Lawsonia intracellularis PHE/MN1-00
lipoprotein, putative
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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